Job Description P00582 Confidence 100.00% Date Thu Jan 5 10:56:46 GMT 2012 Rank 23 Aligned Residues 250 % Identity 19% Template c3qeaZ_ PDB info PDB header:hydrolase/dna Chain: Z: PDB Molecule:exonuclease 1; PDBTitle: crystal structure of human exonuclease 1 exo1 (wt) in complex with dna2 (complex ii) Resolution 3.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	P	L	I	L	V	D	G	S	S	Y	L	Y	R	A	Y	H	A	F	P	P	L	T	N	S	A	G	E	P	T	G	A	M	Y	G	V	L	N	M	L	R	S	L	I	M	Q	Y	K	P	T	H	A	A	V	V	F	D	A	K	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	R
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																															.
Template Sequence		K	G	Q	V	V	A	V	D	T	Y	C	W	L	H	K	G	A	I	A	C	A	.	E	K	L	A	K	G	E	P	T	D	R	Y	V	G	F	C	M	K	F	V	N	M	L	L	S	H	G	I	K	P	.	I	L	V	F	D	G	C	T	L	P	S	K	K	E	V	E	R	S	R	R	E	R	R	Q	A	N	L
Template Known Secondary structure		T	T	S																T	T		.					T	T																				T	T				.							S			T	T	S
Template Predicted Secondary structure																							.																															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		D	E	L	F	E	H	Y	K	S	H	R	P	P	M	P	D	D	L	R	A	Q	.	.	.	.	.	.	.	.	I	E	P	L	H	A	M	V	K	A	M	G	L	P	L	L	A	V	S	G	V	E	A	D	D	V	I	G	T	L	A	R	E	A	E	K	A	G	R	P	V	L	I	S	T	G	D	K	D	M	A
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																				.													.	.	.	.
Template Conservation																																																		.													.	.	.	.
Template Sequence		L	K	G	K	Q	L	L	R	E	G	K	V	S	E	A	R	E	C	F	T	R	S	I	N	I	T	H	A	M	A	H	K	V	I	K	A	A	R	S	Q	G	V	D	C	L	V	A	P	.	Y	E	A	D	A	Q	L	A	Y	L	N	K	.	.	.	.	A	G	I	V	Q	A	I	I	T	E	D	S	D	L	L
Template Known Secondary structure								T	T	T	T			T	T						G	G	G																	T	T	T							S	.	S												.	.	.	.	T	T	S		S					S		G	G	G	G
Template Predicted Secondary structure																																																		.													.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																	.	.												.	.	.	.
Query SS confidence																	.	.												.	.	.	.
Query Sequence		Q	L	V	T	P	N	I	T	L	I	N	T	M	T	N	.	.	T	I	L	G	P	E	E	V	V	N	K	.	.	.	.	Y	G	V	P	P	E	L	I	I	D	F	L	A	L	M	G	D	S	S	D	N	I	P	G	V	P	G	V	G	E	K	T	A	Q	A	L	L	Q	G	L	G	G	L	D	T	L	Y	A
Query Conservation																	.	.												.	.	.	.
Alig confidence																	.	.												.	.	.	.																	.	.																											.
Template Conservation																																																		.	.																											.
Template Sequence		A	F	G	C	K	K	V	I	L	K	M	D	Q	F	G	N	G	L	E	I	D	Q	A	R	L	G	M	C	R	Q	L	G	D	V	F	T	E	E	K	F	R	Y	M	C	I	L	S	G	.	.	C	D	Y	L	S	S	L	R	G	I	G	L	A	K	A	C	K	V	L	R	L	A	N	N	P	D	.	I	V	K
Template Known Secondary structure		G	G	T		S					S			T	T	S							G	G	G	G	G	G		T	T	T	T	T	T	T	S													.	.		S	S	S				T	T																S		.
Template Predicted Secondary structure																																																		.	.																											.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.												.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	E	K	I	A	G	L	S	F	R	G	A	K	T	M	A	A	K	L	E	Q	N	K	E	V	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	S	Y	Q	L	A	T	I	K	T	D	V	E	L	E	L	T	C	E	Q	L	E	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																						.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation									.																																								.
Template Sequence		V	I	K	K	I	G	H	.	Y	L	K	M	N	I	T	V	P	E	D	Y	I	N	G	F	I	R	A	N	N	T	F	L	Y	Q	L	V	F	D	P	I	K	R	K	L	I	P	L	.	N	A	Y	E	D	D	V	D	P	E	T	L	S	Y
Template Known Secondary structure				T	T				.		T	T	S																											T	T	T	T					S	.	S				T	T			G	G	G		G	G
Template Predicted Secondary structure									.																																								.
Template SS confidence
		253	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions