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Job DescriptionP00582
Confidence78.28%DateThu Jan 5 10:56:46 GMT 2012
Rank132Aligned Residues124
% Identity19%Templatec3ot4F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:putative isochorismatase; PDBTitle: structure and catalytic mechanism of bordetella bronchiseptica nicf
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20.........30.........40.........50. ........60.........70........
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Query Sequence  VQIPQNP. LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIM. . QYKPTHAAVVFDAKGKTFRDELFEHYK
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Template Sequence  LPLKAPYGLLIVDFVNGFA. . . . . . . . . . DPAQFGGGNIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFSIK
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TTT

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   17..20.........30..... ....40.........50.........60.........70.........80......
 
   7980. ........ 90.........100.........110.........120.........130...
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Query Sequence  SHR. . . . . . . . . . . . . . . . . PPMPDDLR. . . . . . . . AQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVL
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Template Sequence  VPGMLTLKEHAPASAIVPQLAPQAGEYVVRKSTPSAFYGTMLAAWLAQRGVQTLLVAGATTS. GVRASVVDAMSAGFRPL
Template Known Secondary structure  STTGGG
BTT
GGGSB
GGG


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   87..90.........100.........110.........120.........130.........140........ .150.........160.....
 
   134..
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Query Sequence  IST
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Template Sequence  VLS
Template Known Secondary structure 
Template Predicted Secondary structure 
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   167..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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