Job Description P00582 Confidence 100.00% Date Thu Jan 5 10:56:46 GMT 2012 Rank 17 Aligned Residues 261 % Identity 20% Template c3oryA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flap endonuclease 1; PDBTitle: crystal structure of flap endonuclease 1 from hyperthermophilic2 archaeon desulfurococcus amylolyticus Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		Q	N	P	L	I	L	V	D	G	S	S	Y	L	Y	R	A	Y	H	A	F	P	.	.	.	.	.	P	L	T	N	S	A	G	E	P	T	G	A	M	Y	G	V	L	N	M	L	R	S	L	I	M	Q	Y	K	P	T	H	A	A	V	V	F	D	A	K	G	K	T	F	R	D	E	L	F	E	H	Y	K	S	H
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.																										.	.
Template Conservation																																																					.	.
Template Sequence		H	G	K	I	I	V	I	D	G	Y	N	A	L	Y	Q	F	L	A	A	I	R	Q	P	D	G	T	P	L	M	D	N	N	G	R	I	T	S	H	L	S	G	L	F	Y	R	T	I	N	I	V	E	.	.	A	G	I	K	P	V	Y	V	F	D	G	K	P	P	E	L	K	A	R	E	I	E	R	R	K	A	V
Template Known Secondary structure		T	T																			B		T	T	S		B		B		T	T	S		B																	.	.	T	T									S	S		G	G	G
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		81	.	.	.	.	.	.	.	.	90	.																								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	P	M	P	D	D	L	R	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	P	L	H	A	M	V	K	A	M	G	L	P	L	L	A	V	S	G	V	E	A	D	D	V	I	G	T	L	A	R	E	A	E	K	A	G	R	P	V	L	I	S	T	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.													.	.	.	.
Template Conservation																																																							.													.	.	.	.
Template Sequence		K	E	E	A	A	K	K	Y	E	E	A	V	Q	S	G	D	L	E	L	A	R	R	Y	A	M	M	S	A	K	L	T	E	E	M	V	R	D	A	K	S	L	L	D	A	M	G	I	P	W	V	Q	A	P	.	A	E	G	E	A	Q	A	A	Y	I	V	K	.	.	.	.	K	G	D	A	Y	A	S	A	S	Q
Template Known Secondary structure																T									T																						T							S	.	S												.	.	.	.	T	T	S		S					S
Template Predicted Secondary structure																																																							.													.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150																.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	D	M	A	Q	L	V	T	P	N	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	N	T	M	T	N	T	I	L	G	P	E	E	V	V	N	K	Y	G	V	P	P	E	L	I	I	D	F	L	A	L	M	G	D	S	S	D	N	I	P	G	V	P	G	V	G	E	K	T	A	Q
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation																																																																.
Template Sequence		D	Y	D	S	L	L	F	G	S	P	K	L	V	R	N	L	T	I	S	G	R	R	K	L	P	R	K	N	E	Y	V	E	V	K	P	E	L	I	E	L	D	K	L	L	V	Q	L	G	I	T	L	E	N	L	I	D	I	G	I	L	L	G	.	T	D	Y	N	P	D	G	F	E	G	I	G	P	K	K	A	L
Template Known Secondary structure		S	S					T	T		S					S	T	T	T							S	S	T	T																				T															.	B	T	T	B	T	T		S	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	L	L	Q	G	L	G	G	L	D	T	L	Y	A	E	P	E	K	I	A	G	L	S	F	R	G	A	K	T	M	A	A	K	L	E	Q	N	K	E	V	A	Y	L	S	Y	Q	L	A	T	I	K	T	D	V	E	L	E	L	T	C	E	Q	L	E	V	Q	Q	P	A	A	E	E	L	L	G	L	F	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	V	K	A	Y	G	G	I	E	K	I	P	K	P	I	L	K	S	P	.	.	I	E	V	D	V	I	A	I	K	K	Y	F	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	V	T	D	N	Y	R	I	E	W	H	T	P	D	P	D	A	V	K	R	I	L	V	D	E
Template Known Secondary structure								T	S	S	T	T	S		G	G	G				S	.	.	S													S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																			T	T	T
Template Predicted Secondary structure																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.																			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	K	Y	E	F	K	R	W	T	A	D	V	E	A	G
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		H	D	F	S	I	D	R	V	S	T	A	L	E	R	Y	V	K	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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