Return to main results Retrieve Phyre Job Id

Job DescriptionP00582
Confidence26.33%DateThu Jan 5 10:56:46 GMT 2012
Rank256Aligned Residues71
% Identity27%Templatec3e8mD_
PDB info PDB header:transferaseChain: D: PDB Molecule:acylneuraminate cytidylyltransferase; PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily
Resolution1.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140...... ...150.........160.........170.........180.........190.......
Predicted Secondary structure 










....
























Query SS confidence 























. . . .


















































Query Sequence  REAEKAGRPVLISTGDKDMAQLVT. . . . PNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVG
Query Conservation        
  
 
 
 


  


 ....  
 
             
    

 
 
  
  

 

 






 


Alig confidence 























....






























....















Template Conservation    
   

 
 


             
           
  

  
    

   

 .... 


  


 
   

Template Sequence  FWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLEQVA. . . . YIGDDLNDAKLLKRVG
Template Known Secondary structure  TT


S


TT
S
S
S
T

GGG....

SGGGTTSS
Template Predicted Secondary structure 


















....




Template SS confidence 














































































   41........50.........60.........70.........80.........90......... 100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions