Job Description P00582 Confidence 97.15% Date Thu Jan 5 10:56:46 GMT 2012 Rank 82 Aligned Residues 164 % Identity 23% Template c3d45B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of mouse parn in complex with m7gpppg Resolution 3.00 Å

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		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.																												.	370	.	.	.	.	.	.	.	.	.						380	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		E	E	T	L	K	A	W	I	A	K	L	E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	L	S	F	A	I	E	P	G	V	.	.	.	.	.	A	A	Y	I
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		K	I	N	L	H	K	V	Y	Q	A	I	E	E	A	D	F	F	A	I	D	G	E	F	S	G	I	S	D	G	P	S	V	T	A	L	T	S	G	F	D	T	P	E	E	R	Y	Q	K	L	K	K	H	S	M	D	F	L	L	F	Q	F	G	L	C	A	F	K	Y	D	H	T	D	S	K	H	V	T	K	S	F
Template Known Secondary structure																S									S		S		S	S	S						S		S	S															T	T	B														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		384	.	.							.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.																																													.	.	410	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	A	.	.	.	.	.	.	H	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	D	E	K
Query Conservation					.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	Y	V	F	P	K	P	F	S	R	S	S	P	D	V	K	F	V	C	Q	S	S	S	I	D	F	L	A	S	Q	G	F	D	F	N	K	V	F	C	S	G	I	P	Y	L	N	Q	E	E	E	R	Q	L	R	E	T	K	E	Q	E	E	L	N	D	A	V	G	F	S	R	V	I	H	A	I	A	N	S	G
Template Known Secondary structure					B						S	S	S	S						B												T	T								T	T		B		B														G	G	G	T					S	B	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.															.	440	.	.	.	.	.	.	.	.	.	450			.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																			.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																			.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	A	N	.	.	Y	G	I	E	L	R	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	D	T	M	L	E	S	Y	I	L	N	.	.	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E
Query Conservation																			.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																			.	.			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.														.
Template Conservation																							.																																															.
Template Sequence		K	L	V	V	G	H	N	M	L	L	D	V	M	H	T	I	H	Q	F	Y	C	.	P	L	P	A	D	L	N	E	F	K	E	M	A	I	C	V	F	P	R	L	L	D	T	K	L	M	A	S	T	Q	P	F	K	D	I	I	N	N	T	S	L	A	E	L	E	K	.	R	L	K	E	T	P	F	D	P	P	K
Template Known Secondary structure							S	S													T		.				S	S													S									T	T	S	T	T						S			S							.		T	T	S	T	T
Template Predicted Secondary structure																							.																																															.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	S	A	E	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Y	D	A	Y	I	T	G	L	C	F	I	S	M	A	N	Y	L
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.																360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions