Job Description P00582 Confidence 97.38% Date Thu Jan 5 10:56:46 GMT 2012 Rank 77 Aligned Residues 141 % Identity 11% Template c3cm6A_ PDB info PDB header:hydrolase, apoptosis Chain: A: PDB Molecule:cell death-related nuclease 4; PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er Resolution 2.60 Å

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.																						.	.	.	.	400	.	.	.
Predicted Secondary structure																		.	.	.										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	.	.	.	N	L	V	G	L	S	F	A	I	.	.	.	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	R	E	R	A	L	E
Query Conservation																		.	.	.										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.										.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	I	L	D	F	E	T	T	S	D	A	A	N	Q	D	Y	P	C	E	V	I	Q	F	A	I	V	A	Y	D	V	P	N	D	K	I	R	E	D	I	S	F	N	K	Y	V	K	P	V	L	N	R	T	L	T	K	N	C	V	D	F	T	G	I	P	Q	R	S	I	D	T	A	D	T	F	D	V	V	Y	E
Template Known Secondary structure													T	T			S															T	T	T	T													B		S	S			S																		T	S		B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.							.	.	.	.	.	.	430						.	.	.	.	.	.				.	.	.	440	.	.	.	.	.	.	.	.							.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.								.	.	.	.	.							.	.	.													.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.								.	.	.	.	.							.	.	.													.	.	.	.	.	.
Query Sequence		L	L	K	P	L	L	E	D	E	K	A	L	K	V	G	Q	N	L	K	Y	.	.	.	.	.	.	D	R	G	I	L	A	N	.	.	.	.	.	Y	G	I	E	L	R	.	.	.	G	I	A	F	D	T	M	L	E	S	Y	I	.	.	.	.	.	.	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E
Query Conservation																						.	.	.	.	.	.								.	.	.	.	.							.	.	.													.	.	.	.	.	.
Alig confidence													.	.								.	.	.	.	.	.								.	.	.	.	.							.	.	.													.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		Q	F	Q	Q	W	L	I	T	L	G	L	.	.	E	E	G	K	F	A	F	V	C	D	S	R	Q	D	L	W	R	I	A	Q	Y	Q	M	K	L	S	N	I	Q	M	P	A	F	F	R	Q	Y	I	N	L	Y	K	I	F	T	N	E	M	D	R	M	G	P	K	E	L	S	A	T	T	N	I	G	K	M	N	E
Template Known Secondary structure													.	.		T	T	S						S	S	S					T									T	T					G	G	G	S																									S
Template Predicted Secondary structure													.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	D	L	P	T	I	G	R	A	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	D	D	C	L	N	I	A	T	I	L	Q	R	M	I	N	M
Template Known Secondary structure			T	T					S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180																							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions