Return to main results Retrieve Phyre Job Id

Job DescriptionP00582
Confidence27.84%DateThu Jan 5 10:56:46 GMT 2012
Rank249Aligned Residues57
% Identity12%Templatec2rnjA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:response regulator protein vrar; PDBTitle: nmr structure of the s. aureus vrar dna binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   758.760.........770.........780.........790.........800.........810......
Predicted Secondary structure 










Query SS confidence 


























































Query Sequence  KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE
Query Conservation 
 
 

  

 
   

  



  

   
       
 
          
   


 
Alig confidence 










































..













Template Conservation    

  
  
    


  
 

  

      
  

   

.. 


  
   


 
Template Sequence  MEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDR. . TQAVIYAFQHNLIQ
Template Known Secondary structure  TT

TTT

TT

SS..T


Template Predicted Secondary structure 










..




Template SS confidence 


























































   153......160.........170.........180.........190..... ....200.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions