Job Description P00582 Confidence 98.61% Date Thu Jan 5 10:56:46 GMT 2012 Rank 54 Aligned Residues 144 % Identity 23% Template c2p1jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima Resolution 2.50 Å

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.																			.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	E	D	E
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	V	L	D	F	E	T	T	G	L	D	P	Q	V	D	E	I	I	E	I	G	A	V	K	I	Q	G	G	Q	I	V	D	E	Y	H	T	L	I	K	P	S	R	E	I	S	R	K	S	S	E	I	T	G	I	T	Q	E	M	L	E	N	K	R	S	I	E	E	V	L	P	E	F	L	G	F	L	E	D	S
Template Known Secondary structure										S	S	S		T	T	T													T	T													S	S																		T	T																S	S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.						.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	A	N	Y	.	.	.	.	.	G	I	E	L	R	G	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N
Query Conservation																					.	.	.	.	.
Alig confidence				.	.																.	.	.	.	.																									.								.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																													.								.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	.	.	V	A	H	N	A	N	F	D	Y	R	F	L	R	L	W	I	K	K	V	M	G	L	D	W	E	R	P	Y	I	D	T	L	A	L	A	K	S	L	L	K	L	R	S	Y	.	S	L	D	S	V	V	E	.	K	L	G	L	G	P	F	R	H	H	R	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.			T	T																																						S			.								.			T							S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.																																													.								.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		438	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490		.	.	.	.	.	.	.	.	.	500	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	A	L	D	D	A	R	V	T	A	Q	V	F	L	R	F	V	E	M	M	K	K	E	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																			T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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