Job Description P00582 Confidence 100.00% Date Thu Jan 5 10:56:46 GMT 2012 Rank 21 Aligned Residues 273 % Identity 19% Template c1ul1Y_ PDB info PDB header:hydrolase/dna binding protein Chain: Y: PDB Molecule:flap endonuclease-1; PDBTitle: crystal structure of the human fen1-pcna complex Resolution 2.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		Q	N	P	L	I	L	V	D	G	S	S	Y	L	Y	R	A	Y	H	A	F	P	P	L	T	N	S	A	G	E	P	T	G	A	M	Y	G	V	L	N	M	L	R	S	L	I	M	.	Q	Y	K	P	T	H	A	A	V	V	F	D	A	K	G	K	T	F	R	D	E	L	F	E	H	Y	K	S	H	R	P	P	M
Query Conservation																																																.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																	.					.	.	.																									.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																						.	.	.																									.	.
Template Sequence		F	G	R	K	V	A	I	D	A	S	M	S	I	Y	Q	F	L	I	T	.	.	.	.	.	.	.	.	.	.	.	T	S	H	L	M	G	M	F	Y	R	T	I	R	M	M	E	N	G	I	K	P	.	.	.	V	Y	V	F	D	G	K	P	P	Q	L	K	S	G	E	L	A	K	R	S	E	T	K	Q	.	.
Template Known Secondary structure		T	T																		.	.	.	.	.	.	.	.	.	.	.																	T	T				.	.	.							S					T	T	G	G	G	G	G	G	T			T		.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																						.	.	.																									.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		P	D	D	L	R	A	Q	I	E	P	L	H	A	M	V	K	A	M	G	L	P	L	L	A	V	S	G	V	E	A	D	D	V	I	G	T	L	A	R	E	A	E	K	A	G	R	P	V	L	I	S	T	G	D	K	D	M	A	Q	L	V	T	P	N	I	T	L	I	N	T	M	T	N	.	.	.	.	.	.	T
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.													.	.	.	.																															.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																					.													.	.	.	.
Template Sequence		.	.	.	.	.	.	H	N	D	E	C	K	H	L	L	S	L	M	G	I	P	Y	L	D	A	P	.	S	E	A	E	A	S	C	A	A	L	V	K	.	.	.	.	A	G	K	V	Y	A	A	A	T	E	D	M	D	C	L	T	F	G	S	P	V	L	M	R	H	L	T	A	S	E	A	K	K	L	P	I	Q
Template Known Secondary structure		.	.	.	.	.	.				T					T	T	T	T	T							S	.	S											T	.	.	.	.	T	T	S	S	S					S	S	T					T	T		S					S	T	T	S		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																					.													.	.	.	.
Template SS confidence
								137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	P	E	E	V	V	N	K	Y	G	V	P	P	E	L	I	I	D	F	L	A	L	M	G	D	S	S	D	N	I	P	G	V	P	G	V	G	E	K	T	A	Q	A	L	L	Q	G	L	G	G	L	D	T	L	Y	A	E	P	E	K	I	A	G	L	S	F	R	G	A	K	T	M	A	A	K	L	E	Q
Query Conservation
Alig confidence																												.	.																																													.	.	.	.	.	.
Template Conservation																												.	.																																													.	.	.	.	.	.
Template Sequence		E	F	H	L	S	R	I	L	Q	E	L	G	L	N	Q	E	Q	F	V	D	L	C	I	L	L	G	.	.	S	D	Y	C	E	S	I	R	G	I	G	P	K	R	A	V	D	L	I	Q	K	H	K	S	I	E	E	I	V	R	R	L	D	P	N	K	Y	P	V	P	E	N	W	L	.	.	.	.	.	.	H	K
Template Known Secondary structure												T	T															.	.		S	S	S				S	S													S	S	S								S		S	T	T	S				T	T			.	.	.	.	.	.	T	T
Template Predicted Secondary structure																												.	.																																													.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.						.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																											.						.	.	.	.	.
Query SS confidence																																											.						.	.	.	.	.
Query Sequence		N	K	E	V	A	Y	L	S	Y	Q	L	A	T	I	K	T	D	V	E	L	E	L	T	C	E	Q	L	E	V	Q	Q	P	A	A	E	E	L	L	G	L	F	.	K	K	Y	E	F	.	.	.	.	.	K	R	W	T	A	D	V	E	A	G	K	W	L	Q	A	K	G	A	K	P	A	A	K	P	Q	E	T	S
Query Conservation																																											.						.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																							.						.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		E	A	H	Q	L	F	L	E	P	E	V	.	.	.	.	.	.	.	.	L	D	P	E	S	V	E	L	K	W	S	E	P	N	E	E	E	L	I	K	F	M	C	G	E	K	Q	F	S	E	E	R	I	R	S	G	V	K	R	L	S	K	S	R	Q	G	S	T	Q	G	R	L	D	D	F	F	K	V	T	G	S
Template Known Secondary structure							T	T	S				.	.	.	.	.	.	.	.			S	T	T															T	T	T	T	T	T	T	T																	T	T	T	S	S				S	T	T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	E	A	P	E	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	S	A	K	R	K	E	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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