Job Description P00582 Confidence 100.00% Date Thu Jan 5 10:56:46 GMT 2012 Rank 13 Aligned Residues 250 % Identity 22% Template c1rxvA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:flap structure-specific endonuclease; PDBTitle: crystal structure of a. fulgidus fen-1 bound to dna Resolution 2.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		Q	N	P	L	I	L	V	D	G	S	S	Y	L	Y	R	A	Y	H	A	F	.	.	.	.	.	P	P	L	T	N	S	A	G	E	P	T	G	A	M	Y	G	V	L	N	M	L	R	S	L	I	M	Q	Y	K	P	T	H	A	A	V	V	F	D	A	K	G	K	T	F	R	D	E	L	F	E	H	Y	K	S	H
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																											.	.
Template Conservation																																																					.	.
Template Sequence		S	G	K	K	I	A	V	D	A	F	N	T	L	Y	Q	F	I	S	I	I	R	Q	P	D	G	T	P	L	K	D	S	Q	G	R	I	T	S	H	L	S	G	I	L	Y	R	V	S	N	M	V	E	.	.	V	G	I	R	P	V	F	V	F	D	G	E	P	P	E	F	K	K	A	E	I	E	E	R	K	K	R
Template Known Secondary structure		T	T																		S	B		T	T	S		B		B		T	T	S		B																	.	.	T	T													G	G	G
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.																							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	P	M	P	D	D	L	R	A	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	H	A	M	V	K	A	M	G	L	P	L	L	A	V	S	G	V	E	A	D	D	V	I	G	T	L	A	R	E	A	E	K	A	G	R	P	V	L	I	S	T	G	D
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.
Template Conservation																																																						.													.	.	.	.
Template Sequence		R	A	E	A	E	E	M	W	I	A	A	L	Q	A	G	D	K	D	A	K	K	Y	A	Q	A	A	G	R	V	D	E	Y	I	V	D	S	A	K	T	L	L	S	Y	M	G	I	P	F	V	D	A	P	.	S	E	G	E	A	Q	A	A	Y	M	A	A	.	.	.	.	K	G	D	V	E	Y	T	G	S	Q	D
Template Known Secondary structure																T		S	T	T							T																			T							S	.	S												.	.	.	.	T	T	S		S					S	S
Template Predicted Secondary structure																																																						.													.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	M	A	Q	L	V	T	P	N	I	T	L	I	N	T	M	T	N	T	I	L	G	P	E	E	V	V	N	K	Y	G	V	P	P	E	L	I	I	D	F	L	A	L	M	G	D	S	S	D	N	I	P	G	V	P	G	V	G	E	K	T	A	Q	A	L	L	Q	G	L	G	G	L	D	T	L	Y	A	E	P
Query Conservation
Alig confidence																																																.	.
Template Conservation																																																.	.
Template Sequence		Y	D	S	L	L	F	G	S	P	R	L	A	R	N	L	A	I	K	P	E	I	I	I	L	E	S	N	L	K	R	L	G	L	T	R	E	Q	L	I	D	I	A	I	L	V	G	.	.	T	D	Y	N	E	G	V	K	G	V	G	V	K	K	A	L	N	Y	I	K	T	Y	G	D	I	F	R	A	L	K	A	L
Template Known Secondary structure		S					T	T		S					S	T	T																T													T		.	.		T	T					T	T														S	S								S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	K	I	A	G	L	S	F	R	G	A	K	T	M	A	A	K	L	E	Q	N	K	E	V	A	Y	L	S	Y	Q	L	A	T	I	K	T	D	V	E	L	E	L	T	C	E	Q	L	E	V	Q	Q	P	A	A	E	E	L	L	G	L	.	F	K	K	Y	E	F	K	R
Query Conservation																																																														.
Alig confidence							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	N	I	D	.	.	.	.	.	.	.	H	V	E	E	I	R	N	F	F	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	V	T	D	D	Y	R	I	E	F	R	E	P	D	F	E	K	A	I	E	F	L	C	E	E	H	D	F	S	R
Template Known Secondary structure		S				T	.	.	.	.	.	.	.	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.																.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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