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Job DescriptionP00582
Confidence100.00%DateThu Jan 5 10:56:46 GMT 2012
Rank16Aligned Residues255
% Identity22%Templatec1b43A_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (fen-1); PDBTitle: fen-1 from p. furiosus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20..... ....30.........40.........50.........60.........70.........80
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Query Sequence  QNPLILVDGSSYLYRAYHAF. . . . . PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSH
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Template Sequence  YGKKIAIDALNAIYQFLSTIRQKDGTPLMDSKGRITSHLSGLFYRTINLME. . AGIKPVYVFDGEPPEFKKKELEKRREA
Template Known Secondary structure  TT
SB
TTS
B
B
TTS
B
..TT


S



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SSTT



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   1920.........30.........40.........50.........60......... 70.........80.........90......
 
   81........90 .........100.........110.........120.........130.......
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Query Sequence  RPPMPDDLRA. . . . . . . . . . . . . . . . . . . . . . . QIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTG
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Template Sequence  REEAEEKWREALEKGEIEEARKYAQRATRVNEMLIEDAKKLLELMGIPIVQAP. SEGEAQAAYMAA. . . . KGSVYASASQ
Template Known Secondary structure  TTS
TSGGGTT


S.S
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S
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   97..100.........110.........120.........130.........140......... 150.........160. ........170.
 
   138.140.........150....... ..160.........170.........180.........190.........200..
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Query Sequence  DKDMAQLVTPNITLINTMTN. . . . . . . . . . . . . . . TILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQ
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Template Sequence  DYDSLLFGAPRLVRNLTITGKRKLPGKNVYVEIKPELIILEEVLKELKLTREKLIELAILVG. TDYNPGGIKGIGLKKAL
Template Known Secondary structure  SSTT
SSTTT

TTSS


T


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TTSTT
STT

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   172.......180.........190.........200.........210.........220.........230... ......240.........250
 
   203......210.........220.........230.........240.........250.........260.........270......... 280.
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Query Sequence  ALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLF. KK
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Template Sequence  EIVRHSKDPLAKFQKQSDVDL. . . . . . YAIKEFFLN. . . . . . . . . . . . . . . . . . PPVTDNYNLVWRDPDEEGILKFLCDE
Template Known Secondary structure  T
SSGGGGTGGG
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TTT
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   251........260.........270. ........280 .........290.........300......
 
   282.... ...290..
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Query Sequence  YEFKR. . . . . WTADVE
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Template Sequence  HDFSEERVKNGLERLK
Template Known Secondary structure  T


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   307..310.........320..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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