Job Description P00582 Confidence 100.00% Date Thu Jan 5 10:56:46 GMT 2012 Rank 14 Aligned Residues 254 % Identity 22% Template c1a77A_ PDB info PDB header:5'-3' exo/endo nuclease Chain: A: PDB Molecule:flap endonuclease-1 protein; PDBTitle: flap endonuclease-1 from methanococcus jannaschii Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		Q	N	P	L	I	L	V	D	G	S	S	Y	L	Y	R	A	Y	H	A	F	.	.	.	.	.	P	P	L	T	N	S	A	G	E	P	T	G	A	M	Y	G	V	L	N	M	L	R	S	L	I	M	Q	Y	K	P	T	H	A	A	V	V	F	D	A	K	G	K	T	F	R	D	E	L	F	E	H	Y	K	S	H
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																											.	.
Template Conservation																																																					.	.
Template Sequence		K	G	K	K	V	A	I	D	G	M	N	A	L	Y	Q	F	L	T	S	I	R	L	R	D	G	S	P	L	R	N	R	K	G	E	I	T	S	A	Y	N	G	V	F	Y	K	T	I	H	L	L	E	.	.	N	D	I	T	P	I	W	V	F	D	G	E	P	P	K	L	K	E	K	T	R	K	V	R	R	E	M
Template Known Secondary structure		T	T																		S	B		T	T	S		B		B		T	T	S		B																	.	.	T	T											T	T					S	S			S	S		S	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.																								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	P	M	P	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	Q	I	E	P	L	H	A	M	V	K	A	M	G	L	P	L	L	A	V	S	G	V	E	A	D	D	V	I	G	T	L	A	R	E	A	E	K	A	G	R	P	V	L	I	S	T	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.														.	.	.	.
Template Conservation																																																							.														.	.	.	.
Template Sequence		K	E	K	A	E	L	K	M	K	E	A	I	K	K	E	D	F	E	E	A	A	K	Y	A	K	R	V	S	Y	L	T	P	K	M	V	E	N	C	K	Y	L	L	S	L	M	G	I	P	Y	V	E	A	P	.	S	E	G	E	A	Q	A	S	Y	M	A	K	K	.	.	.	.	G	D	V	W	A	V	V	S	Q
Template Known Secondary structure		S	S	S	S	S								S					S	S	T	T	S	S	S	S	T	T		S																	T							S	.	S													.	.	.	.	T	S	S	S					S
Template Predicted Secondary structure																																																							.														.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		D	K	D	M	A	Q	L	V	T	P	N	I	T	L	I	N	T	M	T	N	.	.	.	T	I	L	G	P	E	E	V	V	N	K	Y	G	V	P	P	E	L	I	I	D	F	L	A	L	M	G	D	S	S	D	N	I	P	G	V	P	G	V	G	E	K	T	A	Q	A	L	L	Q	G	L	G	G	L	D	T	L
Query Conservation																						.	.	.
Alig confidence																						.	.	.																												.
Template Conservation																																																				.
Template Sequence		D	Y	D	A	L	L	Y	G	A	P	R	V	V	R	N	L	T	T	T	K	E	M	P	E	L	I	E	L	N	E	V	L	E	D	L	R	I	S	L	D	D	L	I	D	I	A	I	F	M	G	.	T	D	Y	N	P	G	G	V	K	G	I	G	F	K	R	A	Y	E	L	V	R	S	G	V	A	K	D	V	L
Template Known Secondary structure		S	S	G	G	G	G	G	T		S					S	S	S			S	S															T															.		T	T	S	T	T		S	T	T												T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.						.	.
Predicted Secondary structure																																																																			.								.	.	.	.	.
Query SS confidence																																																																			.								.	.	.	.	.
Query Sequence		Y	A	E	P	E	K	I	A	G	L	S	F	R	G	A	K	T	M	A	A	K	L	E	Q	N	K	E	V	A	Y	L	S	Y	Q	L	A	T	I	K	T	D	V	E	L	E	L	T	C	E	Q	L	E	V	Q	Q	P	A	A	E	E	L	L	G	L	F	.	K	K	Y	E	F	K	R	.	.	.	.	.	W	T
Query Conservation																																																																			.								.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.								.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	E	V	E	Y	Y	D	.	.	.	.	.	.	.	.	E	I	K	R	I	F	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	V	T	D	N	Y	S	L	S	L	K	L	P	D	K	E	G	I	I	K	F	L	V	D	E	N	D	F	N	Y	D	R	V	K	K	H	V
Template Known Secondary structure						T	T			.	.	.	.	.	.	.	.								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.									260	.	.	.	.	.	.	.																			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		289	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	L	Y	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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