Return to main results Retrieve Phyre Job Id

Job DescriptionP37610
Confidence100.00%DateThu Jan 5 11:55:45 GMT 2012
Rank8Aligned Residues241
% Identity15%Templated1y0za_
SCOP infoDouble-stranded beta-helix Clavaminate synthase-like gamma-Butyrobetaine hydroxylase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.. .......60.........70.........80.. .......90.........100......
Predicted Secondary structure 






.

















.





















Query SS confidence 























.





























.























Query Sequence  DNQFEQLYHAVLRHQVVFLRDQAI. TPQQQRALAQRFGELHIHPVYPHAEGVDEI. IVLDTHNDNPPDNDNWHTDVTFIE
Query Conservation        
   
   
 

 

  
.        
  

                 .                


  
  
Alig confidence 























.





























.























Template Conservation        
   
   






      
 
       
            
      
           
  


 

  
Template Sequence  KTQKHYLDSLLHESGAVLFRGFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVR
Template Known Secondary structure  TS
SS


S


B



SSS

TT

S
TTS

TTTTSS
Template Predicted Secondary structure 

















































Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100.........110.........120.......
 
   107..110.........120.........130.........140.........150.........160.........170....
Predicted Secondary structure 































............
Query SS confidence 



































































. . . . . . . . . . . .
Query Sequence  TPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRW. . . . . . . . . . . .
Query Conservation    
    
 
   
  

 
   
   
   
          
                         ............
Alig confidence 



































































............
Template Conservation   

    
 
      



   
       
    

    
                            
 
      
Template Sequence  EFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLA
Template Known Secondary structure  S

S

S






SS

TTSTT


TT
S
Template Predicted Secondary structure 








































Template SS confidence 















































































   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   175....180.........190.........200... ......210.........220.......
Predicted Secondary structure  ..............













.............










Query SS confidence  . . . . . . . . . . . . . .




























. . . . . . . . . . . . .























Query Sequence  . . . . . . . . . . . . . . REAVAKNPPLLHPVVRTHPVSGKQALFVN. . . . . . . . . . . . . EGFTTRIVDVSEKESEALLSFLFA
Query Conservation  ..............            
 
   
 

       .............                     
  
Alig confidence  ..............




























.............























Template Conservation 
           
  
          
 
  

 

   
 
                       

       
  
  
Template Sequence  EQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLR
Template Known Secondary structure  TT

TTS

S
TTTT

S


BTTB
GGGTTTS



Template Predicted Secondary structure 


























Template SS confidence 















































































   208.210.........220.........230.........240.........250.........260.........270.........280.......
 
   228.230.........240.........250.........260.........270..
Predicted Secondary structure 





















Query SS confidence 












































Query Sequence  HITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRAT
Query Conservation              

 




 

 



 
        
 
 
  
Alig confidence 

..































.







Template Conservation    ..        
  




 

 
 



  
 
 .

 
    
Template Sequence  IL. . EEECVAVPWQRGDVLLIDNWAVLHSRRPFDPP. RRVLASLC
Template Known Secondary structure  ..
B




TT
TTT

S
.
Template Predicted Secondary structure 
..
















.

Template SS confidence 












































   288. 290.........300.........310.........320. ........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions