Job Description P37610 Confidence 100.00% Date Thu Jan 5 11:55:45 GMT 2012 Rank 9 Aligned Residues 226 % Identity 18% Template d1ds1a_ SCOP info Double-stranded beta-helix Clavaminate synthase-like Clavaminate synthase Resolution 1.08

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		N	Q	F	E	Q	L	Y	H	A	V	L	R	H	Q	V	V	F	L	R	D	Q	A	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	Q	Q	R	A	L	A	Q	R	F	G	E	L	H	I	H	P	V	Y	P	H	.	.	.	.	A	E	G	V	D	E	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		T	A	L	D	T	F	N	A	E	G	S	E	D	G	H	L	L	L	R	G	L	P	V	E	A	D	A	D	L	P	T	T	P	S	S	T	P	A	P	E	D	R	S	L	L	T	M	E	A	M	L	G	L	V	G	R	R	L	G	L	H	T	G	Y	R	E	L	R	S	G	T	V	Y	H	D	V	Y	P	S	P
Template Known Secondary structure													T	T	S						S						G	G	G	S						S	S	S			T	T																								T	T	S	G	G	G		S	S							T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		I	V	L	D	T	H	N	D	N	P	P	D	N	D	N	W	H	T	D	V	T	F	I	E	T	P	P	A	G	A	I	L	A	A	K	E	L	P	S	T	G	G	D	.	T	L	W	T	S	G	I	A	A	Y	E	A	L	S	V	P	F	R	Q	L	L	S	G	L	R	A	E	H	D	F	R	K	S	F	P	E
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		G	A	H	H	L	S	S	E	T	S	E	T	L	L	E	F	H	T	E	M	A	Y	H	R	L	Q	P	N	Y	V	M	L	A	C	S	R	A	D	H	E	R	T	A	A	T	L	V	A	S	V	R	K	A	L	P	L	L	D	E	R	T	R	A	R	L	L	D	R	R	M	P	C	C	V	D	V	A	F	R	G
Template Known Secondary structure		T			T	T	S	T	T			S	S							T	T	T	T	B	T	T			S											T	T														G	G	G	S									B	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	Y	R	K	T	E	E	E	H	Q	R	W	R	E	A	V	A	K	N	P	P	L	L	H	P	V	V	R	T	H	P	V	S	G	K	Q	A	L	F	V	N	E	G	F	T	T	R	I	V	D	V	S	E	K	E	S	E	A	L	L	S	F	L	F	A	H	I	T	K	P	E	F	Q	V	R	W	R	W	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		G	V	D	D	P	G	A	I	A	Q	V	K	P	L	Y	G	D	A	D	D	P	F	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	R	E	L	L	A	P	E	D	P	A	D	K	E	A	V	A	A	L	S	K	A	L	D	E	V	T	.	.	E	A	V	Y	L	E
Template Known Secondary structure					S	G	G	G	S					S			S		T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T	T	B				S																	T		.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		P	N	D	I	A	I	W	D	N	R	V	T	Q	H	Y	A	N	A	D	Y	.	.	.	L	P	Q	R	R	I	M	H	R	A	T	I	L	G	D	K
Query Conservation																						.	.	.
Alig confidence																						.	.	.
Template Conservation
Template Sequence		P	G	D	L	L	I	V	D	N	F	R	T	T	H	A	R	T	P	F	S	P	R	W	D	G	K	D	R	W	L	H	R	V	Y	I	R	T	D	R
Template Known Secondary structure		T	T							T	T	T													S	S													S	G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions