Job Description P37610 Confidence 96.10% Date Thu Jan 5 11:55:45 GMT 2012 Rank 17 Aligned Residues 141 % Identity 13% Template c3gjbA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:cytc3; PDBTitle: cytc3 with fe(ii) and alpha-ketoglutarate Resolution 2.20 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	Y	H	A	V	L	R	H	Q	V	V	F	L	R	D	Q	A	I	T	P	Q	Q	Q	R	A	L	A	Q	R	F	G	E	L	H	I	H	P	V	Y	P	H	A	E	G	V	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		P	E	E	V	A	R	F	E	R	D	G	Y	I	G	P	V	K	I	.	F	E	P	E	E	M	T	R	R	W	N	I	I	R	R	Q	L	L	D	R	S	L	A	I	Y	P	D	S	N	G	K	A	N	I	S	N	Y	D	R	H	L	D	I	D	L	L	A	E	H	I	M	R	P	E	I	V	D	R	V	G	S
Template Known Secondary structure												S							S	.	S																	T			T	T		S	S		S		S	S					T	T	T	T	G	G	G	T
Template Predicted Secondary structure																				.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
										82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	I	V	L	D	T	H	N	D	N	P	P	D	N	D	N	W	H	T	D	V	T	F	I	E	T	P	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	L	A	A	K	E	L	P	S	T	G	G	D	T	L	W	T	S	G	I	A	A	Y	E	A
Query Conservation		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	I	G	R	N	L	L	C	W	R	S	E	F	F	P	K	Y	Q	G	D	E	G	T	D	W	H	Q	A	A	T	F	A	H	A	T	G	K	P	Q	I	I	W	P	S	D	R	P	A	F	I	G	T	I	T	V	W	T	A	F	T	H	S	T	E	Q	N	G	C	L	Q	L	M	P	G	T	N	.	.	.	.
Template Known Secondary structure					S	S													T	T												B		T	T	T			B	S																				S	S		B		T	T	B	T						S				.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	P	F	R	Q	L	L	S	G	L	R	A	E	H	D	F	R	K	S	F	P	E	Y	K	Y	R	K	T	E	E	E	H	Q	R	W	R	E	A	V	A	K	N	P	P	L	L	H	P	V	V	R	T	H	P	V	S	G	K	Q	A	L	F	V	N	E	G	F	T	T	R	I	V	D	V	S	E	K	E
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	A	L	L	S	F	L	F	A	H	I	T	K	P	E	F	Q	V	R	W	R	W	Q	P	N	D	I	A	I	W	D	N	R	V	T	Q	H	Y	A	N	A	D	Y	L	P	Q	R	R	I	M	H	R	A	T	I	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	A	Y	P	M	V	L	K	P	G	E	A	V	I	F	W	.	S	N	T	M	H	A	S	L	P	H	T	G	S	K	T	D	Y	R	M	G	F	A	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B		T	T							.	T	T	S							B		S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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