Return to main results Retrieve Phyre Job Id

Job DescriptionP03959
Confidence1.53%DateThu Jan 5 10:58:06 GMT 2012
Rank78Aligned Residues29
% Identity21%Templatec3sokB_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:fimbrial protein; PDBTitle: dichelobacter nodosus pilin fima
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   250......... 260.........270........
Predicted Secondary structure  ..
Query SS confidence 









. .


















Query Sequence  LTNFVQMLAI. . FLIPTALCFAFGEVMGDRR
Query Conservation 


 
  
 
..

 
  
           
Alig confidence 









..


















Template Conservation 

















 
        

 
Template Sequence  LIELMIVVAIIGILAAFAIPAYNDYIARSQA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






























   3......10.........20.........30...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions