Job Description P03959 Confidence 1.91% Date Thu Jan 5 10:58:06 GMT 2012 Rank 52 Aligned Residues 122 % Identity 7% Template c3riaC_ PDB info PDB header:transport protein/immune system Chain: C: PDB Molecule:avermectin-sensitive glutamate-gated chloride channel glucl PDBTitle: c. elegans glutamate-gated chloride channel (glucl) in complex with2 fab, ivermectin and iodide. Resolution 3.80 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	C	A	I	L	G	L	N	M	L	G	L	A	V	L	F	F	M	L	L	G	Q	H	Y	L	P	L	N	P	Q	Q	L	P	G	L	S	W	D	L	A	L	N	T	A	V	S	F	V	T	N	T	N	W	Q	S	Y	S	G	E	T	T	L	S	Y	F	S	Q	M	A	G	L	T	V	Q	N	F	L	S	A
Query Conservation
Alig confidence																						.	.	.	.											.																																.	.	.	.	.
Template Conservation																						.	.	.	.											.																																.	.	.	.	.
Template Sequence		Y	L	L	Q	L	Y	I	P	S	C	M	L	V	I	V	S	W	V	S	F	.	.	.	.	W	F	D	R	T	A	I	P	A	R	.	V	T	L	G	V	T	T	L	L	T	M	T	A	Q	S	A	G	I	N	S	Q	L	P	P	V	S	Y	I	K	A	I	.	.	.	.	.	D	V	W	I	G	A	C	M	T
Template Known Secondary structure						T													T	T	T	.	.	.	.	T	S		T	T						.																					T	S				S	S					.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.											.																																.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	I	A	V	I	F	A	L	I	R	A	F	T	R	Q	S	M	S	T	L	G	N	A	W	V	D	L	L	R	I	T	L	W	V	L	V	P	V	A	L	L	I	A	L	F	F	I	Q	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	F	C	A	L	L	E	F	A	L	V	N	H	I	A	N	A	G	T	T	E	W	N	D	I	S	K	R	V	D	L	I	S	R	A	L	F	P	V	L	F	F	V	F	N	I	L	Y	W	S	R
Template Known Secondary structure																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions