Return to main results Retrieve Phyre Job Id

Job DescriptionP03959
Confidence89.61%DateThu Jan 5 10:58:06 GMT 2012
Rank4Aligned Residues100
% Identity13%Templatec3jycA_
PDB info PDB header:metal transportChain: A: PDB Molecule:inward-rectifier k+ channel kir2.2; PDBTitle: crystal structure of the eukaryotic strong inward-rectifier2 k+ channel kir2.2 at 3.1 angstrom resolution
Resolution3.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.........320.........330.........340.......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  FAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAV
Query Conservation            
    
      
  
        
      
           



 


    
 
   

 




 
Alig confidence 


























































..


















Template Conservation   
  

   
   
      

     

 

  
    

            
     .. 
  

 


 
 





Template Sequence  MFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDDTFKPCVLQVN. . GFVAAFLFSIETQTTIGYG
Template Known Secondary structure 
GGGGTTS
SSTTTTGGG
SS

SS


ST

..SSS


S
Template Predicted Secondary structure 






















..



Template SS confidence 















































































   70.........80.........90.........100.........110.........120........ .130.........140.......
 
   348.350.........360.........
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  IAMHDSFTALGGMVPMWLMQIG
Query Conservation 
 
  

 
 
  
 
 




Alig confidence 





















Template Conservation      
  
     
  

 
 
Template Sequence  FRCVTEECPLAVFMVVVQSIVG
Template Known Secondary structure  SS
SS
Template Predicted Secondary structure 







Template SS confidence 





















   148.150.........160.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions