Job Description P03959 Confidence 3.54% Date Thu Jan 5 10:58:06 GMT 2012 Rank 25 Aligned Residues 53 % Identity 19% Template c2axtc_ PDB info PDB header:electron transport Chain: C: PDB Molecule:photosystem ii cp43 protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus Resolution 3.00 Å

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		88	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure								.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	N	P	Q	Q	.	.	.	.	L	P	G	L	S	W	D	L	A	L	N	T	A	V	S	F	V	T	N	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	S	Y	S	G	E	T	T	L	S	Y	F	S	Q	M	A	G	L	T	V	Q	N	F	L	S	A	A
Query Conservation								.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																																														.	.
Template Sequence		P	F	G	G	E	G	W	I	V	S	V	N	N	L	E	D	V	V	G	G	H	I	W	I	G	L	I	C	I	A	G	G	I	W	H	I	L	T	T	P	F	G	W	A	R	R	A	F	I	W	S	G	E	A	Y	L	S	Y	S	L	.	.	G	A	L	S	M	M	G	F	I	A	T	C
Template Known Secondary structure		S	S	S	S	S		S	T	T																												T									T	T	S													.	.
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		5217	.	.	5220	.	.	.	.	.	.	.	.	.	5230	.	.	.	.	.	.	.	.	.	5240	.	.	.	.	.	.	.	.	.	5250	.	.	.	.	.	.	.	.	.	5260	.	.	.	.	.	.	.	.	.	5270	.	.	.	.	.	.			.	.	.	5280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions