 |
Job Description | P37745 | Confidence | 48.23% | Date | Thu Jan 5 11:57:21 GMT 2012 |
Rank | 125 | Aligned Residues | 44 |
% Identity | 18% | Template | c4a1aB_ |
PDB info |
PDB header:ribosome | Chain: B: PDB Molecule:ribosomal protein l3; |
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3.
|
Resolution | 3.52 Å |
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | V | F | D | V | A | V | D | I | R | P | N | S | V | S | F | G | K | W | V | G | V | L | L | S | A | D | N | K | Q | Q | L | W | I | P | K | G | F | A | H | G | F | L | V | L | S | D | I |
Query Conservation |   |
|   |
|   |
|
|   |
|
|   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|   |   |
|
Template Sequence |   |
G | M | T | H | I | L | R | E | V | D | R | S | G | S | R | H | N | K | K | E | V | V | E | A | V | . |
. |
. |
. |
. |
T | V | I | E | C | P | P | M | T | I | V | G | V | V | G | Y | I | D | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| T | T | S | T | T | T | T | S |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|