Job Description P37745 Confidence 81.73% Date Thu Jan 5 11:57:21 GMT 2012 Rank 104 Aligned Residues 84 % Identity 23% Template c3kvaA_ PDB info PDB header:h3k4me3 binding protein, transferase Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 1d; PDBTitle: structure of kiaa1718 jumonji domain in complex with alpha-2 ketoglutarate Resolution 2.79 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90													.	.	.	.										.	.	.	.	.	100
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.
Query Sequence		P	V	S	F	V	Q	D	N	H	S	R	S	S	K	N	V	L	R	G	L	H	F	Q	R	G	E	Y	A	Q	D	K	L	V	R	C	T	H	G	A	V	F	D	V	A	V	D	I	R	P	.	.	.	.	.	.	.	.	.	.	.	.	N	S	V	S	.	.	.	.	.	.	.	.	.	F	G	K	W	V	G
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																					.	.			.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																					.	.
Template Sequence		P	K	P	F	V	Q	K	Y	C	L	M	G	V	Q	D	S	Y	T	D	F	H	I	D	.	.	F	G	G	T	S	V	W	Y	H	V	L	W	G	E	K	I	F	Y	L	I	.	.	K	P	T	D	E	N	L	A	R	Y	E	S	W	S	S	S	V	T	Q	S	E	V	F	F	G	D	K	V	D	K	C	Y	K
Template Known Secondary structure							S								T	T									.	.	G	G	G																		.	.															T	S	G	G	G	G	G	S		G	G	G	G	S	S
Template Predicted Secondary structure																									.	.																					.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	S	A	D	N	K	Q	Q	L	W	I	P	K	G	F	A	H	G	F	L	V	L	S	D	I	A	E	F	Q
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		C	V	V	.	.	K	Q	G	H	T	L	F	V	P	T	G	W	I	H	A	V	L	T	S	Q	D	C	M	A	F	G
Template Known Secondary structure					.	.		T	T							T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		338	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions