Return to main results Retrieve Phyre Job Id

Job DescriptionP37745
Confidence95.76%DateThu Jan 5 11:57:21 GMT 2012
Rank55Aligned Residues99
% Identity11%Templatec3ibmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  HILGYPVSFVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKG
Query Conservation     
      
 
 
 
  
 


 
 
  
  
 


    
 
 

 

 
  




      

      
 

 
Alig confidence 




























....















.........






....










Template Conservation           
      
 

     
 
 ....  
   

 
 
   
.........      
....  

 
 

 
Template Sequence  RPAGQEAPAFETRYFEVEPGGYTTLERHE. . . . HTHVVMVVRGHAEVVL. . . . . . . . . DDRVEPL. . . . TPLDCVYIAPH
Template Known Secondary structure  GGGT

S
S
TT
B


BB
S....S
S
.........TT....
TT

TT
Template Predicted Secondary structure 

















....



.............





Template SS confidence 















































































   45....50.........60.........70... ......80......... 90...... ...100.......
 
   117..120.........130.........140.........150..
Predicted Secondary structure 
























Query SS confidence 



































Query Sequence  FAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDER
Query Conservation   



  
 
 
   
     
 
  
 

   

 
Alig confidence 



































Template Conservation    
   
 
  


 



     
      

   
Template Sequence  AWHQIHATGANEPLGFLCIVDSDRDRPQRPDADDLA
Template Known Secondary structure 



SSS
SS



B


Template Predicted Secondary structure 














Template SS confidence 



































   108.110.........120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions