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Job DescriptionP37745
Confidence97.06%DateThu Jan 5 11:57:21 GMT 2012
Rank29Aligned Residues112
% Identity12%Templatec3ehkC_
PDB info PDB header:plant proteinChain: C: PDB Molecule:prunin; PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  EPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVS
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Template Sequence  RADIFSPRAGRIST. LNSHNLPILRFLRLSAERGFF. . . YRNGIYSPHWNVN. . . AHSVVYVIRGNARVQVVNENGDAI.
Template Known Secondary structure  G
STTT.STTT
GGGTTTT
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TTS

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   367..370.........380 .........390.........400. ........410.... .....420.........430........
 
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Query Sequence  FGKWVGVLLSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPE
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Template Sequence  . . . . . . LDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKTEE. NAF
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SST.T

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   439440.........450.........460.........470..... ...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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