Job Description P37745 Confidence 77.77% Date Thu Jan 5 11:57:21 GMT 2012 Rank 110 Aligned Residues 88 % Identity 14% Template c2yu1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 1a; PDBTitle: crystal structure of hjhdm1a complexed with a-ketoglutarate Resolution 2.70 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																				.	.	.	.	.	.	100
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	P	V	S	F	V	Q	D	N	H	S	R	S	S	K	N	V	L	R	G	L	H	F	Q	R	G	E	Y	A	Q	D	K	L	V	R	C	T	H	G	A	V	F	D	V	A	V	D	I	R	P	N	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	G	K	W	V	G
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		E	M	Q	Y	P	K	V	Q	K	Y	C	L	M	S	V	R	G	C	Y	T	D	F	H	V	D	.	.	F	G	G	T	S	V	W	Y	H	I	H	Q	G	G	K	V	F	W	L	I	P	P	T	A	H	N	L	E	L	Y	E	N	W	L	L	S	G	S	Q	G	D	I	F	L	G	D	R	V	S	D	C	Q	R
Template Known Secondary structure					S												T	T									.	.	G	G	G										S																							T	T			S	S	S						S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	S	A	D	N	K	Q	Q	L	W	I	P	K	G	F	A	H	G	F	L	V	L	S	D	I	A	E	F	Q
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		I	E	L	.	.	K	Q	G	Y	T	F	V	I	P	S	G	W	I	H	A	V	Y	T	P	T	D	T	L	V	F	G
Template Known Secondary structure					.	.		T	T							T	T								S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		268	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions