 |
Job Description | P37745 | Confidence | 91.30% | Date | Thu Jan 5 11:57:21 GMT 2012 |
Rank | 90 | Aligned Residues | 77 |
% Identity | 10% | Template | c2vpvA_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:protein mif2; |
PDBTitle: dimerization domain of mif2p
|
Resolution | 2.7 Å |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | S | F | V | Q | D | N | H | S | R | S | S | K | N | V | L | R | G | L | H | F | Q | R | G | E | Y | A | Q | D | K | L | V | R | C | T | H | G | A | V | F | D | V | A | V | D | I | R | P | N | S | V | S | F | G | K | W | V | G | V | L | L | S | A | D | N | K | Q | Q | L | W | I | P | K | G | F | A | H | G | F |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
| . | . |   |   |   |
|
|   |
|   |   |
|   |   |
Template Sequence |   |
K | E | Y | F | A | S | G | I | L | K | L | P | A | I | S | G | Q | K | K | L | S | N | S | F | R | . |
. |
. |
T | Y | I | T | F | H | V | I | Q | G | I | V | E | V | T | V | C | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | K | F | L | S | V | K | G | S | . |
. |
T | F | Q | I | P | A | F | N | E | Y | A | I |
Template Known Secondary structure |   |
T |
| S |
|  |  |  |  |  |  |  |
| S | S | G | G | G |
|  |  |  |  |
|
| S | . | . | . |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T |
| . | . |  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|  | . | . |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
449 | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | |
|
|
. | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 500 | |
|
. | . | . | . | . | . | . | . | . | 510 | . | . |
  |
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | L | S | D | I | A | E | F | Q | Y | K | T |
Query Conservation |   |
  |   |
|   |
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|   |
|   |   |
|
Template Sequence |   |
A | N | R | G | N | D | E | A | K | M | F | F | V |
Template Known Secondary structure |   |
 |  |
| S | S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
513 | . | . | . | . | . | . | 520 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|