 |
Job Description | P37629 | Confidence | 6.61% | Date | Thu Jan 5 11:56:02 GMT 2012 |
Rank | 48 | Aligned Residues | 113 |
% Identity | 16% | Template | c3qfkA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:uncharacterized protein; |
PDBTitle: 2.05 angstrom crystal structure of putative 5'-nucleotidase from2 staphylococcus aureus in complex with alpha-ketoglutarate
|
Resolution | 2.05 Å |
|
 |
  |   |
303 | . | . | . | . | . | . | 310 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | D | R | F | S | T | I | F | . |
. |
. |
. |
. |
G | D | K | Y | I | L | T | L | L | N | S | M | R | N | M | E | G | N | K | D | S | R | I | N | K | N | V | V | V | L | A | G | N | H | E | I | N | F | N | G | N | Y | T | A | R | L | A | N | H | K | L | S | A | G | D | T | Y | N | L | I | K | T | L | D | V | C |
Query Conservation |   |
|
|
|
|
|
|   |
|   | . | . | . | . | . |
|
|
|   |
|
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
| . |
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
Q | G | S | P | F | C | N | Y | L | I | A | H | S | G | S | S | Q | P | L | V | D | F | Y | N | R | X | A | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | F | G | T | L | . |
G | N | H | E | F | N | Y | G | L | P | Y | L | K | D | T | L | R | . |
. |
. |
. |
. |
. |
. |
. |
R | L | N | Y | P | V | L | C | A | N |
Template Known Secondary structure |   |
S | S | S |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  |  | T |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |
|
| . |
| G | G | G | G | T | T |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
| S | S |
| B |
|
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  | . |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 110 | . | . | . | . | . | . | . | . |
  |
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | D | S | E | R | Q | V | L | T | S | H | H | G | I | I | R | D | E | E | K | K | C | Y | C | L | G | A | L | Q | V | P | F | N | Q | M | K | N | P | . |
. |
. |
. |
. |
. |
. |
. |
T | D | P | E | E | L | A | N | I | F | N | K | K | H | K | E | H | M | D |
Query Conservation |   |
  |
|
|   |   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|   |
|   |
|
|   |
|   |
|   |   |   |
|
|   |
|   | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|   |
|   |
|
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
I | Y | E | N | D | S | T | L | T | D | N | G | V | K | Y | F | Q | V | G | D | Q | T | V | G | V | I | G | L | T | T | Q | F | I | P | H | W | E | Q | P | E | H | I | Q | S | L | T | F | H | S | A | F | E | I | L | Q | Q | Y | L | P | E | X | K | R | H | A | D |
Template Known Secondary structure |   |
 |  |  | T | T |  |  | S | S | S |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| T | T | G | G | G | T | S |
|  |  |  |  | T | T |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|