 |
| Job Description | P30749 | | Confidence | 4.49% | Date | Thu Jan 5 11:46:23 GMT 2012 |
| Rank | 78 | Aligned Residues | 37 |
| % Identity | 19% | Template | c3d8dA_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member |
PDBTitle: crystal structure of the human fe65-ptb1 domain
|
| Resolution | 2.20 Å |
|
|   |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | V | T | V | I | H | R | I | G | E | L | W | P | G | D | E | I | V | F | V | G | V | T | S | A | H | R | S | S | A | F | E | A | G | Q | F | I | M | D | Y | L | K | T | R |
| Query Conservation |   |
  |
|   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |
|   |
|   |
|   |
|   |
|
|   |   |
|
|   |
|   |   |   |   |
|
|   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |
|   |
|
|
|   |
|
|
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   | . | . |   |
|
|   |   |
|
|   |   |
|   |   |   |
| Template Sequence |   |
K | C | F | A | V | R | S | L | G | W | V | E | M | T | E | E | E | . |
. |
. |
. |
. |
L | A | P | G | R | S | S | . |
. |
V | A | V | N | N | C | I | R | Q | L | S | Y | H |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| G | G | G | . | . | . | . | . | G | S | T | T | T |  |  | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
368 | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 390 | . | |
|
. | . | . | . | . | . | . | . | 400 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|