Job Description P77214 Confidence 36.56% Date Thu Jan 5 12:26:26 GMT 2012 Rank 34 Aligned Residues 62 % Identity 19% Template c3ayhB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.														.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.
Predicted Secondary structure																																	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																																	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		T	G	V	V	K	G	I	D	L	E	S	K	K	I	T	I	H	H	D	P	I	A	A	V	N	W	P	E	M	T	M	.	.	.	.	R	F	T	I	T	P	Q	T	K	M	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	T	G	D	K	V	A	F	N	F	V	Q	.	.	.	.	Q	G	N
Query Conservation																																	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence													.	.																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation													.	.
Template Sequence		L	G	K	I	K	S	C	S	E	E	G	.	.	I	R	V	T	I	S	F	F	D	D	I	F	I	P	K	D	M	L	F	D	P	C	V	F	R	P	D	E	R	A	W	V	W	K	I	E	G	E	D	G	S	E	G	T	E	L	Y	F	D	I	D	E	E	I	R	F	Q	I	E	S	E	D	F	V	D	V	S
Template Known Secondary structure										T	T		.	.						S	S								G	G	G	B		T	T					G	G	G	T										T	T	S									T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	T	L	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions