Job Description P77214 Confidence 23.48% Date Thu Jan 5 12:26:26 GMT 2012 Rank 49 Aligned Residues 65 % Identity 15% Template c2rf4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Resolution 3.10 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.																						.	.	.	.	.	.
Query Sequence		T	G	V	V	K	G	I	D	L	E	S	K	K	I	T	I	H	H	D	P	.	.	.	.	I	A	A	V	N	W	P	E	M	T	M	R	F	T	I	T	P	Q	T	K	M	.	.	.	.	.	.	S	E	I	K	T	G	D	K	V	A	F	N	F	V	Q	Q	G	N	L	S	L	L	Q	D	I	K
Query Conservation																						.	.	.	.																						.	.	.	.	.	.
Alig confidence																		.				.	.	.	.										.												.	.	.	.	.	.
Template Conservation																		.																	.
Template Sequence		E	G	Y	I	F	I	Q	S	A	S	H	I	G	L	L	I	.	H	D	A	F	N	A	S	I	K	K	N	N	I	P	V	D	.	W	T	F	V	H	N	D	G	N	S	L	G	H	W	V	D	S	N	G	E	P	I	D	G	K	L	R	F	T	V	R	N	V	H	T	T	G	R	V	V	S	V	D
Template Known Secondary structure										S	S							.	T	T	T							S	T	T	S		S	S	.		B					S								B		S	S			B			S													S	S	S
Template Predicted Secondary structure																		.																	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions