 |
| Job Description | P0AAA3 | | Confidence | 1.41% | Date | Thu Jan 5 11:12:20 GMT 2012 |
| Rank | 100 | Aligned Residues | 20 |
| % Identity | 30% | Template | c2rnmC_ |
| PDB info |
PDB header:protein fibril | Chain: C: PDB Molecule:small s protein; |
PDBTitle: structure of the het-s(218-289) prion in its amyloid form2 obtained by solid-state nmr
|
| Resolution | UNK |
|
| | |
94 | . | . | . | . | . | 100 | |
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . |
| Predicted Secondary structure | |
 | | | |  |
|
| . | . | . | . |
|
|
| | | | | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
T | L | T | Q | L | D | T | . |
. |
. |
. |
S | G | S | T | L | N | V | G | V | D | Y | N | G |
| Query Conservation | |
|
| | | | |
| . | . | . | . | | |
| |
| |
|
|
| |
|
|
|
| Alig confidence | |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| |
| | |
| | | |
| |
| |
|
|
|
|
|
|
|
|
|
| Template Sequence | |
T | T | N | S | V | E | T | V | V | G | K | G | E | S | R | V | L | I | G | N | E | Y | G | G |
| Template Known Secondary structure | |
|
| | | | | | | |
|
| S | S |
| | | | | S |
| | |
| S |
| Template Predicted Secondary structure | |
|
|
|
| | | | | | |
|
|
| | | | | |
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
