 |
Job Description | P0AAA3 | Confidence | 1.53% | Date | Thu Jan 5 11:12:20 GMT 2012 |
Rank | 86 | Aligned Residues | 31 |
% Identity | 23% | Template | c2hjhB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:nad-dependent histone deacetylase sir2; |
PDBTitle: crystal structure of the sir2 deacetylase
|
Resolution | 1.85 Å |
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | L | V | V | T | P | L | G | S | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | Q | Y | A | E | G | I | K | G | F | N | S | Q | K | G | L | F | D | V | A | I | E | G | D |
Query Conservation |   |
|   |
|
|
|
|
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |
|   |   |   |   |
|   |
Template Sequence |   |
T | S | L | K | V | A | P | V | S | E | I | V | N | X | V | P | S | H | V | P | Q | V | L | I | N | R | D | P | V | K | H | A | E | . |
. |
. |
. |
. |
F | D | L | S | L | L | G | Y |
Template Known Secondary structure |   |
|
|
|
|  |  | T | G | G | G |  |  |  |  | S |
| T | T | S |
|  |  |  |  |  | S | S |
|
| T | T |
|
| . | . | . | . | . |
| S |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
472 | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 510 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|