Job Description P0AG38 Confidence 0.61% Date Thu Jan 5 11:28:02 GMT 2012 Rank 62 Aligned Residues 79 % Identity 11% Template d1oeda_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	N	L	A	N	P	K	A	I	I	Y	F	G	S	V	F	S	L	F	V	G	D	N	V	G	T	T	A	R	W	G	I	F	A	L	I	I	V	E	T	L	A	W	F	T	V	V	A	S	L	F	A	L	P	Q	M	R	R	G	Y	Q	R	L	A	K	W	I	D	G	F	A	G	A	L	F	A	G	F
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		F	V	V	N	V	I	I	P	C	L	L	F	S	F	L	T	G	L	V	F	Y	L	P	T	D	S	G	E	K	M	T	L	.	.	.	.	.	.	.	.	S	I	S	V	L	L	S	L	T	V	F	L	L	V	I	V	E	L	I	P	S	T	S	S	A	V	P	L	I	G	K	Y	M	L	F	T	M	I	F	V
Template Known Secondary structure																												G	G	G				.	.	.	.	.	.	.	.																										S				T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		199	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	H	L	I	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	S	I	I	I	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions