Job Description P0AG38 Confidence 0.63% Date Thu Jan 5 11:28:02 GMT 2012 Rank 55 Aligned Residues 92 % Identity 5% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	R	K	E	A	M	M	G	V	L	G	I	T	C	G	V	M	V	W	A	G	I	A	L	L	G	L	H	L	I	I	E	K	M	A	W	L	H	T	L	I	M	V	G	G	G	L	Y	L	C	W	M	G	Y	Q	M	L	R	G	A	L	K	K	E	A	V	S	A	P	A	P	Q	V	E	L	A	K	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q
Template Known Secondary structure				T	T	T	T	T																			T	T	T			S																																	T	S			S							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	F	L	K	G	L	L	T	N	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	L	V	G	I	A	M	V	L	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions