Job Description P0AG38 Confidence 1.05% Date Thu Jan 5 11:28:02 GMT 2012 Rank 30 Aligned Residues 79 % Identity 9% Template c2ksrA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:neuronal acetylcholine receptor subunit beta-2; PDBTitle: nmr structures of tm domain of the n-acetylcholine receptor b2 subunit Resolution UNK

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	N	L	A	N	P	K	A	I	I	Y	F	G	S	V	F	S	L	F	V	G	D	N	V	G	T	T	A	R	W	G	I	F	A	L	I	I	V	E	T	L	A	W	F	T	V	V	A	S	L	F	A	L	P	Q	M	R	R	G	Y	Q	R	L	A	K	W	I	D	G	F	A	G	A	L	F	A	G	F
Query Conservation
Alig confidence																												.	.														.	.	.	.	.	.
Template Conservation																												.	.														.	.	.	.	.	.
Template Sequence		Y	T	I	N	L	I	I	P	C	V	L	I	T	S	L	A	I	L	V	F	Y	L	P	S	D	C	.	.	G	E	K	M	T	L	C	I	S	V	L	L	A	.	.	.	.	.	.	L	T	V	F	L	L	L	I	S	K	I	V	P	P	T	S	L	D	V	P	L	V	G	K	Y	L	M	F	T	M	V	L	V
Template Known Secondary structure						T																T	S				S	.	.														.	.	.	.	.	.										T	T			S	S		T	T
Template Predicted Secondary structure																												.	.														.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		199	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	H	L	I	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	S	I	V	T	S
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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