Job Description P0AG38 Confidence 2.74% Date Thu Jan 5 11:28:02 GMT 2012 Rank 8 Aligned Residues 145 % Identity 13% Template c1xioA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:anabaena sensory rhodopsin; PDBTitle: anabaena sensory rhodopsin Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	F	F	F	V	S	Q	T	A	V	S	R	S	R	K	E	A	M	M	G	V	L	G	I	T	C	G	V	M	V	W	A	G	I	A	L	L	G	L	H	L	I	I	E	K	M	A	W	L	H	T	L	I	M	V	G	G	G	L	Y	L	C	W	M	G	Y	Q	M	L	R	G	A	L	K	K	E	A	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	L	L	L	S	L	S	W	T	A	M	Q	F	I	K	K	D	W	T	L	I	G	F	L	M	S	T	Q	I	V	V	I	T	S	G	L	I	A	D	L	S	E	R	D	W	V	R	Y	L	W	Y	I	C	G	V	C	A	F	L	I	I	L	W	G	I	W	N	P	L	R	A	K	T	R	T	Q	S	S	E
Template Known Secondary structure													T	T	T	S																												S	S																								T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		A	P	A	P	Q	V	E	L	A	K	S	G	R	S	F	L	K	G	L	L	T	N	L	A	N	P	K	A	I	I	Y	F	G	S	V	F	S	L	F	V	G	.	D	N	V	G	T	T	A	R	W	G	I	F	A	L	I	I	V	E	T	L	A	W	F	T	V	V	A	S	L	F	A	L	P	Q	M	R	R	G
Query Conservation																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	N	L	Y	D	K	L	V	T	Y	F	T	V	L	W	I	G	Y	P	I	V	W	I	I	G	P	S	G	F	G	W	I	N	Q	T	I	D	T	F	L	F	C	L	L	P	F	F	S	K	V	G	F	S	F	L	D	L	H	G	L	R	N	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										S	T	T	T	T		S	S																															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		180
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions