Job Description Q9JMS4 Confidence 1.97% Date Wed Jan 25 15:21:16 GMT 2012 Rank 46 Aligned Residues 40 % Identity 28% Template d1pvja_ SCOP info Cysteine proteinases Cysteine proteinases Papain-like Resolution 3.00

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	Q	T	P	K	E	G	L	S	F	A	M	T	T	Y	L	N	L	F	V	K	L	L	I	F	L	Y	I	Q	N	T	K	A	C	L	S	I	N	N	V	N	N	N	S	K	N	K	L	R	S	G	V	S	Y	Y	I	I	N	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		F	A	R	N	E	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	D	S	A	I	T	F	I	Q	K	I	K	.	.	.	.	.	.	.	L	D	K	V	N	L	G	G	E	L	S	G	S	N	M	Y	V	Y	N	I
Template Known Secondary structure			B						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.								T	T	T		S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions