Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS4
Confidence1.48%DateWed Jan 25 15:21:16 GMT 2012
Rank71Aligned Residues8
% Identity25%Templatec2kq0A_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: human nedd4 3rd ww domain complex with ebola zaire virus matrix2 protein vp40 derived peptide ilptappeymea
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.......
Predicted Secondary structure 


Query SS confidence 







Query Sequence  RSGVSYYI
Query Conservation 







Alig confidence 







Template Conservation    

 


Template Sequence  PNGRPFFI
Template Known Secondary structure  TTT
Template Predicted Secondary structure 



Template SS confidence 







   23......30
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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