Job Description P75820 Confidence 99.96% Date Thu Jan 5 12:14:33 GMT 2012 Rank 6 Aligned Residues 145 % Identity 24% Template d1ycka1 SCOP info N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	I	V	E	K	E	G	Y	Q	L	D	T	R	R	Q	A	Q	A	A	Y	P	R	I	K	V	L	V	I	H	Y	T	A	D	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	S	L	A	T	L	T	D	K	Q	V	S	S	H	Y	L	V	P	A	V	P	P	R	Y	N	G	K	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		S	P	I	V	P	R	N	E	W	K	A	L	A	S	E	C	A	Q	H	L	S	L	P	L	R	Y	V	V	V	S	H	T	A	G	S	S	C	N	T	P	A	S	C	Q	Q	Q	A	R	N	V	Q	H	Y	H	M	K	T	L	G	W	C	D	V	G	Y	N	F	L	I	.	.	.	.	.	.	.	G	E	D	G
Template Known Secondary structure					B						T									B			S	S										S	S					S																		T	T			S	S		S		S				.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		R	I	W	Q	L	V	P	E	Q	E	L	A	W	H	A	G	I	S	A	W	R	G	A	T	R	L	N	D	T	S	I	G	I	E	L	E	N	R	G	W	Q	K	S	A	G	V	K	Y	F	A	P	F	E	P	A	Q	I	Q	A	L	I	P	L	A	K	D	I	I	A	R	Y	H	I	.	K	P	E	N	V	V
Query Conservation																																																																											.
Alig confidence																					.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																							.
Template Conservation																					.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		L	V	Y	E	G	R	G	W	N	F	T	G	A	H	S	G	H	L	W	.	.	.	.	.	.	.	N	P	M	S	I	G	I	S	F	M	G	N	Y	M	D	R	V	.	.	.	.	.	.	.	.	P	T	P	Q	A	I	R	A	A	Q	G	L	L	A	C	G	V	A	Q	G	A	L	R	S	N	Y	V	L	K
Template Known Secondary structure						S	S	T	T	T	B			S	S	S		T	T	T	.	.	.	.	.	.	.	G	G	G							S	S			S	S	S		.	.	.	.	.	.	.	.																			T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	A	D	I	A	P	Q	R	K	D	D	P	G	P	L	F	P	W	Q	Q	L	A	Q	Q	G	I	G	A	W	P
Query Conservation
Alig confidence									.	.						.	.	.	.	.							.
Template Conservation									.	.						.	.	.	.	.							.
Template Sequence		G	H	R	D	V	Q	R	.	.	T	L	S	P	G	.	.	.	.	.	N	Q	L	Y	H	L	.	I	Q	N	W	P
Template Known Secondary structure			G	G	G	T	S	S	.	.	S		T	T		.	.	.	.	.							.		T	T	S	T
Template Predicted Secondary structure									.	.						.	.	.	.	.							.
Template SS confidence
		148	.	150	.	.	.	.			.	.	.	.	.						160	.	.	.	.	.		.	.	.	.	170

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions