Job Description P75820 Confidence 30.05% Date Thu Jan 5 12:14:33 GMT 2012 Rank 48 Aligned Residues 88 % Identity 24% Template c3lyfB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:nucleocapsid protein; PDBTitle: crystal structure of the rift valley fever virus nucleocapsid protein Resolution 1.93 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	L	A	Q	Q	G	I	G	A	W	P	D	A	Q	R	V	N	F	Y	L	A	G	R	A	P	H	T	P	V	D	T	A	S	L	L	E	L	L	A	R	Y	G	Y	D	V	K	P	D	M	T	P	R	E	Q	R	R	V	I	M	A	F	Q	M	H	F	R	P	T	L	Y	N	G	E	A	D	A	E	T
Query Conservation
Alig confidence																		.	.																											.	.	.
Template Conservation																		.	.																											.	.	.
Template Sequence		Y	Q	E	L	A	I	Q	F	A	A	Q	A	V	D	N	E	.	.	I	E	Q	W	V	R	E	F	A	Y	Q	G	F	D	A	R	R	V	I	E	L	L	K	Q	Y	G	.	.	.	G	A	D	W	E	K	D	A	K	K	M	I	V	L	A	L	T	R	G	N	K	P	R	R	M	M	M	K	M	S	K	E	G
Template Known Secondary structure												S	S				G	.	.	G	G	G	T	T	T	T	T	S																		.	.	.	G	G	G															T		S							T	T	S
Template Predicted Secondary structure																		.	.																											.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	A	E	A	L	L	E	K	Y	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	T	V	E	A	L	I	N	K	Y	K	L
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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