Job Description P75820 Confidence 100.00% Date Thu Jan 5 12:14:33 GMT 2012 Rank 4 Aligned Residues 140 % Identity 28% Template c3hmaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase xlya; PDBTitle: amidase from bacillus subtilis Resolution 2.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																		.	.	.	.	.								.	.
Query SS confidence																																		.	.	.	.	.								.	.
Query Sequence		G	Y	Q	L	D	T	R	R	Q	A	Q	A	A	Y	P	R	I	K	V	L	V	I	H	Y	T	A	D	D	F	D	S	S	.	.	.	.	.	L	A	T	L	T	D	K	.	.	Q	V	S	S	H	Y	L	V	P	A	V	P	P	R	Y	N	G	K	P	R	I	W	Q	L	V	P	E	Q	E	L	A	W	H	A
Query Conservation																																		.	.	.	.	.								.	.
Alig confidence																																		.	.	.	.	.								.	.									.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		D	F	I	P	V	G	A	N	N	R	P	G	Y	A	M	T	P	L	Y	I	T	V	H	N	T	A	N	T	A	V	G	A	D	A	A	A	H	A	R	Y	L	K	N	P	D	T	T	T	S	W	H	F	T	V	.	.	.	.	.	.	.	.	D	D	T	E	I	Y	Q	H	L	P	L	N	E	N	G	W	H	A
Template Known Secondary structure						T	T		T	T					B																T	T		S									T	S	T	T						S				.	.	.	.	.	.	.	.		S	S						S		T	T	B			S		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	A	W	R	G	A	T	R	L	N	D	T	S	I	G	I	E	L	E	N	R	G	W	Q	K	S	A	G	V	K	Y	F	A	P	F	E	P	A	Q	I	Q	A	L	I	P	L	A	K	D	I	I	A	R	Y	H	I	K	P	E	N	V	V	A	H	A	D	I	A	P	Q	R	K	D	D	P	G	P	L
Query Conservation
Alig confidence							.	.	.	.																		.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation							.	.	.	.																		.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		G	D	G	N	G	.	.	.	.	S	G	N	R	A	S	I	G	I	E	I	C	E	N	A	D	G	.	.	.	.	.	.	.	.	.	.	D	F	A	K	A	T	A	N	A	Q	W	L	I	K	T	L	M	A	E	H	N	I	S	L	A	N	V	V	P	H	K	Y	W	.	.	S	G	K	E	C	P	R	K	L
Template Known Secondary structure		S	S	T	T	S	.	.	.	.					S										T	T	S	.	.	.	.	.	.	.	.	.	.																				T	T			G	G	G								.	.						S	T	T	T
Template Predicted Secondary structure							.	.	.	.																		.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		82	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.											.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.
		181	.		.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		F	P	.	W	Q	Q	L	A	Q	Q	G	I	G
Query Conservation				.
Alig confidence				.					.
Template Conservation									.
Template Sequence		L	D	T	W	D	S	F	.	K	A	G	I	G
Template Known Secondary structure		G	G	G					.			T	T
Template Predicted Secondary structure									.
Template SS confidence
		174	.	.	.	.	.	180		.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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