Job Description P75820 Confidence 55.58% Date Thu Jan 5 12:14:33 GMT 2012 Rank 33 Aligned Residues 106 % Identity 15% Template c3d0kA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative poly(3-hydroxybutyrate) depolymerase lpqc; PDBTitle: crystal structure of the lpqc, poly(3-hydroxybutyrate) depolymerase2 from bordetella parapertussis Resolution 1.83 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	T	R	R	Q	A	Q	A	A	Y	P	R	I	K	V	L	V	I	H	Y	T	A	D	D	F	D	S	S	L	A	T	L	T	D	K	Q	V	S	S	H	Y	L	V	P	A	V	P	P	R	Y	N	G	K	P	R	I	W	Q	L	V	P	E	Q	E	L	A	W	H	A	G	I	S	A	W	R	G	A	T
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	N	T	Y	R	P	Y	G	Y	T	P	D	R	P	V	V	V	V	Q	H	G	V	L	R	N	G	A	D	Y	R	D	F	W	I	P	A	A	D	R	H	K	L	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	P	T	F	S	D	E	I	W	P	G	V	E	S	Y	N	N	G	R
Template Known Secondary structure									T	T			T	T	S									T	T										T								T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	S						T	T	T	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.																.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		R	L	N	D	T	S	I	G	I	E	L	E	N	R	G	W	Q	K	S	A	G	V	K	Y	F	A	P	F	E	P	A	Q	I	Q	A	L	I	P	L	A	K	D	I	I	A	R	Y	H	I	K	P	E	N	.	.	V	V	A	H	A
Query Conservation																																																							.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	T	A	A	G	N	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	D	G	W	T	Y	A	L	V	A	R	V	L	A	N	I	R	A	A	E	I	A	D	C	E	Q	V	Y	L	F	G	H	S
Template Known Secondary structure			B		T	T	S		B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S	T	T													T	T	S				S	S							T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.																		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions