Job Description P75820 Confidence 99.95% Date Thu Jan 5 12:14:33 GMT 2012 Rank 11 Aligned Residues 138 % Identity 19% Template c2rkqA_ PDB info PDB header:immune system Chain: A: PDB Molecule:peptidoglycan-recognition protein-sd; PDBTitle: crystal structure of drosophila peptidoglycan recognition2 protein sd (pgrp-sd) Resolution 1.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																			.																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	E	K	E	G	Y	Q	L	D	T	R	R	Q	A	Q	A	.	A	Y	P	R	I	K	V	L	V	I	H	Y	T	A	D	.	.	.	.	D	F	D	S	S	L	A	T	L	T	D	.	.	.	.	.	.	.	.	.	.	.	K	Q	V	S	S	H	Y	L	V	P	A	V	P	P	R	Y	N	G	K	P	R
Query Conservation																			.																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		I	V	T	R	A	E	W	N	A	K	P	P	N	G	A	I	D	S	M	V	T	P	L	P	R	A	V	I	A	H	T	A	G	G	A	C	A	D	D	V	T	C	S	Q	H	M	R	N	L	Q	N	F	Q	M	S	K	Q	K	F	S	D	I	G	Y	H	Y	L	I	.	.	.	.	.	.	.	G	G	N	G	K
Template Known Secondary structure					T	G	G	G	T						S				B			S	S											S					S																		T	S			S	S		S		S				.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		I	W	Q	L	V	P	E	Q	E	L	A	W	H	A	G	I	S	A	W	R	G	A	T	R	L	N	D	T	S	I	G	I	E	L	E	N	R	G	W	Q	K	S	A	G	V	K	Y	F	A	P	F	E	P	A	Q	I	Q	A	L	I	P	L	A	K	D	I	I	A	R	Y	H	I	K	P	E	.	N	V	V	A
Query Conservation																																																																													.
Alig confidence																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																										.
Template Conservation																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		V	Y	E	G	R	S	P	S	Q	R	G	A	F	A	G	P	N	.	.	.	.	.	.	.	.	N	D	G	S	L	G	I	A	F	I	G	N	F	E	E	R	A	.	.	.	.	.	.	.	.	P	N	K	E	A	L	D	A	A	K	E	L	L	E	Q	A	V	K	Q	A	Q	L	V	E	G	Y	K	L	L	G
Template Known Secondary structure						S		T	T	B			S	S	S	G	G	G	.	.	.	.	.	.	.	.		T	T							S	S			S	S	S		.	.	.	.	.	.	.	.																			T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	D	I	A	P	Q	R	K	D	D	P	G	P	L	F	P	W	Q	Q	L
Query Conservation
Alig confidence								.	.									.
Template Conservation								.	.									.
Template Sequence		H	R	Q	V	S	A	.	.	T	K	S	P	G	E	A	L	.	Y	A	L	I
Template Known Secondary structure		G	G	G	T	S	S	.	.	S		T	T					.
Template Predicted Secondary structure								.	.									.
Template SS confidence
		150	.	.	.	.	.			.	.	.	.	160	.	.	.		.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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