 |
Job Description | P0AAN5 | Confidence | 1.80% | Date | Thu Jan 5 11:13:22 GMT 2012 |
Rank | 84 | Aligned Residues | 27 |
% Identity | 26% | Template | c1utyA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:non-structural protein 2; |
PDBTitle: crystal structure of the rna binding domain of bluetongue2 virus non-structural protein 2(ns2)
|
Resolution | 2.4 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | Y | P | R | E | A | Y | I | V | T | I | E | K | G | K | P | G | Q | T | V | T | W | Y | Q | L | R |
Query Conservation |   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |
|
|
|
Template Sequence |   |
Q | P | Y | M | R | N | D | F | D | R | N | E | M | P | D | L | P | G | V | M | R | S | N | Y | D | I | R |
Template Known Secondary structure |   |
| T | T |
| B | S | S |
|
| G | G | G |
|
|
|
| T | T |
|
|
|
| S | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|