 |
Job Description | P77439 | Confidence | 77.52% | Date | Thu Jan 5 12:29:20 GMT 2012 |
Rank | 105 | Aligned Residues | 92 |
% Identity | 20% | Template | d1xxxa1 |
SCOP info | TIM beta/alpha-barrel
| Aldolase
| Class I aldolase
|
Resolution | 2.28 |
|
 |
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | C | G | V | L | A | I | N | P | N | D | A | V | S | G | Y | Y | Q | V | A | Q | T | L | A | D | K | R | Q | K | Q | Q | A | Q | A | A | A | Q | L | A | Y | S | R | D | N | K | R | I | D | I | A | A | N | I | G | T | A | . |
. |
. |
. |
. |
. |
L | E | A | P | G | A | F | A | N | G | A | E | G | V | G | L | F |
Query Conservation |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|
|   |   |   | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
| . | . | . |
Template Sequence |   |
G | C | D | G | L | V | V | S | G | T | T | G | E | S | P | T | T | T | D | G | E | K | I | E | L | L | R | A | V | L | E | A | V | G | D | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | R | V | I | A | G | A | G | T | Y | D | T | A | H | S | I | R | L | A | K | A | C | A | A | E | G | A | H | G | L | . |
. |
. |
Template Known Secondary structure |   |
T |
| S |  |  |  |  | S | S | T | T | T | T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
  |
  |   |
405 | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | E | M | L | Y | M | D | R | D | S | A | P | D | E | Q | E | Q | F | E | A | Y | Q | Q | V | L | L | A | A | G | D | K | P | I | I | F |
Query Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   | . |   |   |
|
|   |
|
Template Sequence |   |
. |
. |
. |
L | V | V | T | P | Y | Y | S | K | P | P | Q | R | G | L | Q | A | H | F | T | A | V | A | D | A | T | . |
E | L | P | M | L | L |
Template Known Secondary structure |   |
. | . | . |  |  |  |
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
. | . | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
. | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|