Job Description P77439 Confidence 97.55% Date Thu Jan 5 12:29:20 GMT 2012 Rank 60 Aligned Residues 191 % Identity 13% Template d1d8ca_ SCOP info TIM beta/alpha-barrel Malate synthase G Malate synthase G Resolution 2.00

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		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	R	T	Q	L	R	A	I	L	R	A	A	S	F	G	N	A	Q	L	M	I	P	M	V	H	S	L	D	Q	I	L	W	V	K	G	E	I	Q	K	A	I	V	E	L	K	R	D	G	L	R	H	A	E	T	I	T	L	G	I	M	V	E	V	P	S	V	C	Y	I	I	D	H	F	C	D	E	V	D	F
Query Conservation
Alig confidence									.																																						.	.	.						.
Template Conservation									.																																						.	.	.						.
Template Sequence		I	A	L	Y	D	L	K	.	V	Q	K	N	S	R	T	G	S	V	Y	I	V	K	P	K	X	H	G	P	Q	E	V	A	F	A	N	K	L	F	T	R	I	E	T	X	L	.	.	.	G	X	A	P	N	.	T	L	K	X	G	I	X	D	E	E	R	R	T	S	L	N	L	R	S	C	I	A	Q	A	R	N
Template Known Secondary structure									.			S	S		S	S	S								S			S																			.	.	.	T			T	T	.										S						T							T	T	T	T
Template Predicted Secondary structure									.																																						.	.	.						.
Template SS confidence
		370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.				.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		558	.	560	.	.	.									.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Query Sequence		F	S	I	G	S	N	.	.	.	.	.	.	.	.	D	M	T	Q	Y	L	Y	A	V	D	R	N	N	P	R	V	S	P	L	Y	N	P	I	T	P	S	F	L	R	M	L	Q	Q	I	V	T	T	A	H	Q	R	G	K	W	V	G	I	C	G	E	L	G	G	E	S	R	Y	L	P	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																																												.																.	.	.	.	.	.	.
Template Conservation																																																											.
Template Sequence		R	V	A	F	I	N	T	G	F	L	D	R	T	G	D	E	X	H	S	V	X	E	A	G	P	X	L	R	K	N	Q	X	K	S	T	P	W	I	K	A	Y	E	R	N	N	V	L	S	G	L	F	C	G	L	R	G	K	.	A	Q	I	G	K	G	X	W	A	X	P	D	L	X	A	D	X	Y	S	Q	K	G
Template Known Secondary structure		T																			T	G	G	G	S		B			G	G	G	G	G	G																		T	T		T	T	T	.	S										T	T									T
Template Predicted Secondary structure																																																											.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		623	.	.	.	.	.	.	630	.	.	.	.		.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	L	L	G	L	G	L	D	E	L	S	M	.	S	S	P	R	I	P	A	V	K	S	Q	L	R	Q	L	D	S	E	A	C	R	E	L	A	R	Q	A	C	E	C	R	S	A	Q	E	I	E	A	L	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		D	Q	L	R	A	G	A	N	T	A	W	V	P	S	P	T	A	A	T	L	H	A	L	H	Y	H	Q	T	N	V	Q	S	V	Q	A	N	I	A	Q	T	E	F	N	A	E	F	E	P	L	L	D	D	L
Template Known Secondary structure						T	T		S					S	S														S												S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions