Job Description P77439 Confidence 36.06% Date Thu Jan 5 12:29:20 GMT 2012 Rank 176 Aligned Residues 71 % Identity 18% Template c4a17Q_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:rpl17; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2. Resolution 3.52 Å

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		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.																																.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	L	S	M	S	S	P	R	I	P	A	V	K	S	Q	L	R	Q	L	D	S	E	A	C	R	E	L	A	R	Q	A	C	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	A	Q	E	I	E	A	L	L	T	A	F	T
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	L	R	V	H	F	K	N	T	Y	E	V	V	R	A	I	K	G	L	N	L	E	N	A	K	R	Y	L	K	A	V	I	D	R	K	R	C	I	P	F	T	R	F	T	G	C	I	G	R	T	A	Q	A	H	E	F	G	R	T	Q	G	R	W	P	V	K	S	V	K	V	I	L	G	L	L	D	N	L	S
Template Known Secondary structure						S													T	T	S	B													T	T	S	S						S			T	T			B		G	G	G	G	G	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	D	V	R	P	L	L	A	L	E	N	I	F	V	D	Q	D	F	S	N	K
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	N	A	Q	A	K	.	S	L	N	T	A	N	L	V	I	Q	H	G	Q	V	N	R
Template Known Secondary structure				T	T	T	T	.	T			S	T	T
Template Predicted Secondary structure								.
Template SS confidence
		102	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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