Job Description P77439 Confidence 30.03% Date Thu Jan 5 12:29:20 GMT 2012 Rank 192 Aligned Residues 72 % Identity 14% Template c3jywN_ PDB info PDB header:ribosome Chain: N: PDB Molecule:60s ribosomal protein l17(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution Resolution 8.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.																																.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	E	L	S	M	S	S	P	R	I	P	A	V	K	S	Q	L	R	Q	L	D	S	E	A	C	R	E	L	A	R	Q	A	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	S	A	Q	E	I	E	A	L	L	T	A	F
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	Y	L	R	V	S	F	K	N	T	R	E	T	A	Q	A	I	N	G	W	E	L	T	K	A	Q	K	Y	L	E	Q	V	L	D	H	Q	R	A	I	P	F	R	R	F	N	S	S	I	G	R	T	A	Q	G	K	E	F	G	V	T	K	A	R	W	P	A	K	S	V	K	F	V	Q	G	L	L	Q	N	A
Template Known Secondary structure				S	B													T	T	S	S	S	B													S	S	S			B				S			S	S			B		G	G	G		S	S	S			B		B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	E	E	D	V	R	P	L	L	A	L	E	N	I	F	V	D	Q	D	F	S	N	K
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		A	A	N	A	E	A	K	.	G	L	D	A	T	K	L	Y	V	S	H	I	Q	V	N	Q
Template Known Secondary structure									.	T	S		G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		99	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions