Return to main results Retrieve Phyre Job Id

Job DescriptionP77439
Confidence42.13%DateThu Jan 5 12:29:20 GMT 2012
Rank164Aligned Residues93
% Identity16%Templatec3h5dD_
PDB info PDB header:lyaseChain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   325....330.........340.........350.........360.........370.........380......... 390.........400
Predicted Secondary structure 





















....



Query SS confidence 
































































. . . .










Query Sequence  QPAVLDAQCGVLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALE. . . . APGAFANGAEG
Query Conservation    




  
 
   
                            

 
 

  
 
 


    
....   
   



Alig confidence 




























.................


















....










Template Conservation   

   




   

 


  
      .................       

 

   
    
  
  
   
   
Template Sequence  DGILLAGTTAESPTLTHDEELELFAAVQK. . . . . . . . . . . . . . . . . VVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFA
Template Known Secondary structure 
SSTTTTGGGS
.................SSSSS



SS


S
Template Predicted Secondary structure 








.................












Template SS confidence 















































































   43......50.........60.........70. ........80.........90.........100.....
 
   401........410.........420.........430.........440
Predicted Secondary structure 












Query SS confidence 







































Query Sequence  VGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIF
Query Conservation 


 






     
 



   
  
     
 



Alig confidence 










.....

















.




Template Conservation    

  
    .....     
  
   

    . 

 
Template Sequence  AGLAIVPYYNK. . . . . PSQEGMYQHFKAIADASD. LPIII
Template Known Secondary structure 


SS
.....

S
S.S
Template Predicted Secondary structure 






.....



.

Template SS confidence 







































   106...110...... ...120.........130.... .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions