Job Description P77439 Confidence 98.73% Date Thu Jan 5 12:29:20 GMT 2012 Rank 56 Aligned Residues 288 % Identity 16% Template c3cuzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase a; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.04 Å

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		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.																								.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	V	S	G	Y	Y	Q	V	A	Q	T	L	A	D	K	R	Q	K	Q	Q	A	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	L	A	Y	S	R	D	N	K	R	I	D	I	A	A	N	I	G	T	A	L	E	A	P	G	A	F	A	N	G	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.									.
Template Conservation																																																										.									.
Template Sequence		T	E	L	V	T	H	F	T	P	Q	R	N	K	L	L	A	A	R	I	Q	Q	Q	Q	D	I	D	N	G	T	L	P	D	F	I	S	E	T	A	S	I	R	D	A	D	W	K	I	R	G	I	P	A	D	L	E	D	.	R	R	V	E	I	T	G	P	.	V	E	R	K	M	V	I	N	A	L	N	A	N	V
Template Known Secondary structure																												T	T							S	T	T					T	S					S				G	G	G	S		.		S							.											T	S	S	S
Template Predicted Secondary structure																																																										.									.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		E	G	V	G	L	F	R	T	E	M	L	Y	M	D	R	D	S	A	P	D	E	Q	E	Q	F	E	A	Y	Q	Q	V	L	L	A	A	G	D	K	P	I	I	F	R	T	M	D	I	G	G	D	K	S	I	P	Y	L	N	I	P	Q	E	E	N	P	F	L	G	Y	R	A	V	R	I	Y	P	E	F	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence					.	.	.	.	.	.																														.	.	.	.	.	.																																		.	.	.
Template Conservation					.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		K	V	F	.	.	.	.	.	.	M	A	D	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	.	.	.	.	.	.	I	S	Y	T	N	E	A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L	P	E	K	H	V	T	W
Template Known Secondary structure		S			.	.	.	.	.	.				S	S	T	T																				T	T		.	.	.	.	.	.						T	T	S							S	S											T	T
Template Predicted Secondary structure					.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		112	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
								476	.	.	.	480	.	.	.	.	.	.					.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.												.	.	.	.
Query SS confidence		.	.	.	.	.	.												.	.	.	.
Query Sequence		.	.	.	.	.	.	A	G	L	F	R	T	Q	L	R	A	I	.	.	.	.	L	R	A	A	S	F	G	N	A	Q	L	M	I	P	M	V	H	S	L	D	Q	I	L	W	V	K	G	E	I	Q	K	A	I	V	E	L	K	R	D	G	L	R	H	A	E	T	I	T	L	G	I	M	V	E	V	P	S	V	C
Query Conservation		.	.	.	.	.	.												.	.	.	.
Alig confidence		.	.	.	.	.	.												.	.	.	.																																								.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		R	G	E	A	I	P	G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P	.	.	.	.	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V
Template Known Secondary structure		T	T																								T	T																														T	T			.	.	.	.	T	T		S								S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		546	.	.	.	550	.	.					.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.						.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.								.
Predicted Secondary structure									.	.	.	.																																		.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																		.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		Y	I	I	D	H	F	C	.	.	.	.	D	E	V	D	F	F	S	I	G	S	N	D	M	T	Q	Y	L	Y	A	V	D	R	N	N	P	R	V	S	P	L	Y	N	P	.	.	.	.	.	I	T	P	S	F	L	R	M	L	Q	Q	I	V	T	T	A	H	Q	R	G	K	W	V	.	.	.	.	.	.	.	G
Query Conservation									.	.	.	.																																		.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence									.	.	.	.															.																			.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		F	Q	M	D	E	I	L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	.	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M	A	A	F	I
Template Known Secondary structure		T	S								T	T	T	T								S					.							T	T	T		G	G	G					G	G	G			T	T	S																	T	T										B
Template Predicted Secondary structure																											.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.								.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.					.
Query SS confidence																			.	.	.	.	.	.	.					.
Query Sequence		I	C	G	E	L	G	G	E	S	R	Y	L	P	L	L	L	G	.	.	.	.	.	.	.	L	G	L	D	.	E	L	S	M	S	S	P	R	I	P	A	V	K	S	Q	L	R	Q
Query Conservation																			.	.	.	.	.	.	.					.
Alig confidence																			.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		P	S	K	D	E	E	H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D
Template Known Secondary structure				S	S	G	G	G																			T		S					S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions