 |
Job Description | P77439 | Confidence | 49.54% | Date | Thu Jan 5 12:29:20 GMT 2012 |
Rank | 152 | Aligned Residues | 135 |
% Identity | 19% | Template | c3bw2A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:2-nitropropane dioxygenase; |
PDBTitle: crystal structures and site-directed mutagenesis study of nitroalkane2 oxidase from streptomyces ansochromogenes
|
Resolution | 2.10 Å |
|
 |
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | K | R | I | D | I | A | A | N | I | G | T | A | L | E | A | P | G | A | F | A | N | G | A | E | G | V | G | L | F | R | T | E | M | L | Y | M | D | R | D | S | A | P | D | E | Q | E | Q | F | E | A | Y | Q | Q | V | L | L | A | A | G | D | K | P | I | I | F | R | T | M | D | I | G | G | D | K | S | I | P | Y | L |
Query Conservation |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |
| . |   |
|
|
|   |
|
|   |
|   |
|
|   |   |   |   | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
| . | . |   |   |   |
|   |
|
Template Sequence |   |
D | I | P | V | V | A | A | G | G | I | M | R | G | G | Q | I | A | A | V | L | A | A | G | A | D | A | A | . |
Q | L | G | T | A | F | L | A | T | D | E | S | G | A | P | G | . |
. |
. |
. |
. |
. |
P | H | K | R | A | L | T | D | P | L | F | A | R | T | R | L | T | R | A | F | T | G | . |
. |
R | P | A | R | S | L |
Template Known Secondary structure |   |
S | S |
|  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  | . |  |  | S |  |  |  |  | T | S | T | T |
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  | T | T |
| G | G | G |
|
|  |  |  |  | S | T | T | T | S | . | . | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
|
. | . | . | . | . | . |
  |
  |   |
455 | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | |
|
|
|
. | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | P | Q | E | E | N | P | F | L | G | Y | R | A | V | R | I | Y | P | E | F | A | G | L | F | R | T | Q | L | R | A | I | L | R | A | A | S | F | G | N | A | Q | L | M | I | P | M | . |
. |
. |
. |
V | H | S | L | D | Q | I | L | W | V | K | G | E | I | Q | K | A | I | V | E | L | K | R |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |
|
| . | . | . | . |
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
V | N | R | F | L | R | E | H | G | P | Y | A | P | A | A | Y | P | D | V | H | H | L | T | S | P | L | R | K | A | A | A | K | A | G | D | A | Q | G | M | A | L | W | A | G | Q | G | H | R | M | A | R | E | L | . |
P | A | G | R | L | V | E | V | L | A | A | E | L | A | E |
Template Known Secondary structure |   |
. | . | . | . | . |
|
|  |  |  |  |  |  | G | G | G |
|
| S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | S |
|
| B |
|
| T | T | G | G | G |
|
|
| S | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | |
. | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|